| Protein: | REV1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 985 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REV1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..985] | [1..985] |
|
|
0.0 | [109..865] | [9..782] |
|
|
0.0 | [132..836] | [5..797] |
|
|
0.0 | [227..844] | [249..969] |
|
|
0.0 | [242..844] | [266..968] |
|
|
0.0 | [358..800] | [2..420] |
|
|
0.0 | [358..800] | [2..420] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MGEHGGLVDL LDSDLEYSIN RETPDKNNCL SQQSVNDSHL TAKTGGLNAR SFLSTLSDDS 60
61 LIEYVNQLSQ TNKNNSNPTA GTLRFTTKNI SCDELHADLG GGE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-251] |
1 11 21 31 41 51
| | | | | |
1 DSPIARSVIE IQESDSNGDD VKKNTVYTRE AYFHEKAHGQ TLQDQILKDQ YKDQISSQSS 60
61 KIFKNCVIYI NGYTKPGRLQ LHEMIVLHGG KFLHYLSSKK TVTHIVASNL PLKKRIEFAN 120
121 YKVVSPDWIV DSVKEARLLP WQNYSLTS
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1n5oX_ |
| Description: | Breast cancer associated protein, BRCA1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [252-342] |
1 11 21 31 41 51
| | | | | |
1 KLDEQQKKLD NCKTVNSIPL PSETSLHKGS KCVGSALLPV EQQSPVNLNN LEAKRIVACD 60
61 DPDFLTSYFA HSRLHHLSAW KANLKDKFLN E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [343-365] |
1 11 21 31 41 51
| | | | | |
1 NIHKYTKITD KDTYIIFHID FDC
|
|
Region B: Residues: [439-537] |
1 11 21 31 41 51
| | | | | |
1 EQFQLKSEAF YSTLKRLNIF NLILPISIDE AVCVRIIPDN IHNTNTLNAR LCEEIRQEIF 60
61 QGTNGCTVSI GCSDSLVLAR LALKMAKPNG YNITFKSNL
|
| Detection Method: | |
| Confidence: | 197.0103 |
| Match: | 1jxlA_ |
| Description: | DinB homolog (DBH) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [366-438] |
1 11 21 31 41 51
| | | | | |
1 FFATVAYLCR SSSFSACDFK RDPIVVCHGT KNSDIASCNY VARSYGIKNG MWVSQAEKML 60
61 PNGIKLISLP YTF
|
|
Region B: Residues: [538-619] |
1 11 21 31 41 51
| | | | | |
1 SEEFWSSFKL DDLPGVGHST LSRLESTFDS PHSLNDLRKR YTLDALKASV GSKLGMKIHL 60
61 ALQGQDDEES LKILYDPKEV LQ
|
| Detection Method: | |
| Confidence: | 197.0103 |
| Match: | 1jxlA_ |
| Description: | DinB homolog (DBH) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [620-807] |
1 11 21 31 41 51
| | | | | |
1 RKSLSIDINW GIRFKNITQV DLFIERGCQY LLEKLNEINK TTSQITLKLM RRCKDAPIEP 60
61 PKYMGMGRCD SFSRSSRLGI PTNEFGIIAT EMKSLYRTLG CPPMELRGLA LQFNKLVDVG 120
121 PDNNQLKLRL PFKTIVTNRA FEALPEDVKN DINNEFEKRN YKRKESGLTS NSLSSKKKGF 180
181 AISRLEVN
|
| Detection Method: | |
| Confidence: | 197.0103 |
| Match: | 1jxlA_ |
| Description: | DinB homolog (DBH) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [808-985] |
1 11 21 31 41 51
| | | | | |
1 DLPSTMEEQF MNELPTQIRA EVRHDLRIQK KIQQTKLGNL QEKIKRREES LQNEKNHFMG 60
61 QNSIFQPIKF QNLTRFKKIC QLVKQWVAET LGDGGPHEKD VKLFVKYLIK LCDSNRVHLV 120
121 LHLSNLISRE LNLCAFLNQD HSGFQTWERI LLNDIIPLLN RNKHTYQTVR KLDMDFEV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
