| Protein: | RRS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 203 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRS1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-75 | [1..203] | [1..203] |
|
|
7.0E-61 | [11..202] | [58..230] |
|
|
7.0E-58 | [11..202] | [24..196] |
|
|
4.0E-50 | [20..202] | [12..176] |
|
|
1.0E-45 | [13..203] | [8..174] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MSAEDYKNLP VTVEKPIPVV YDLGNLAAFD SNVLDKNDLD SSNARREEKI KSLTRDNVQL 60
61 LINQLLSLPM KTTTESVGGT GGQSSVMTLL QLPDPTTDLP REKPLPKAKA MTKWEKFAAK 120
121 KGIKPKERAG KMIYD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.266 | 0.337 | rRNA processing | a.1.1 | Globin-like |
| View | Download | 0.266 | 0.326 | ribosome biogenesis | a.1.1 | Globin-like |
| View | Download | 0.223 | 0.137 | rRNA processing | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.223 | 0.132 | ribosome biogenesis | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.395 | 0.050 | rRNA processing | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.395 | 0.048 | ribosome biogenesis | f.14.1 | Voltage-gated potassium channels |
|
Region A: Residues: [136-203] |
1 11 21 31 41 51
| | | | | |
1 EASGEWVPKW GYKGANKKLD DQWLVEVDDK VKGTDNELID PRTLNRAERK RLVKKNEKQQ 60
61 RRNMKNAL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.264 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.370 | a.2.3 | Chaperone J-domain |
| View | Download | 0.311 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.530 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.291 | a.2.3 | Chaperone J-domain |
| View | Download | 0.248 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.231 | a.28.1 | ACP-like |
| View | Download | 0.215 | d.58.49 | YajQ-like |
| View | Download | 0.203 | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.203 | f.14.1 | Voltage-gated potassium channels |
