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Protein Overview: rrbs-1

General Information:
Name(s) found: rrbs-1 / CE08186 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00007617 locus:rrbs-1 Ribosome biogenesis regulatory protein homolog status:Confirmed UniProt:Q9XVT0 protein_id:CAB02731.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 333 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    ribosome biogenesis [IEALink to PubMed article]
    positive regulation of embryonic development [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKSTEVEK AIDPIIDLGN LLFIDREPIQ GDASEGLEER ARKNTQLLFN NIWQLEQKRV  60
   61 EEAIIVTLPP ATYRLPREKR LPEKKEPTKW EKYAAEKGIE KRKKDKKVFD EATKEWKPTY 120
  121 GYRRGNDDTK DWLIEIPDNA EDPNKDFFAE RREKKKERVA KNDMQRMKNL ARQMKTTVKS 180
  181 GPSTEKMIGV GVDAKEKSKQ QVRFAVDRAK LATASAGKFQ EGLKGEKANV KTGKKRKFEA 240
  241 NEAPVSGEKE RALQILQRMK SKKAKIVEEK AAAVAGPLRE KKEKSERKGA KDQTRQKSQI 300
  301 HRQQWFKNKV DGKKKGTGGA GKKGANKAKA RKG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] Pfam 117.275724 No description for PF04939.3 was found. No confident structure predictions are available.
    2 View Details [188..333] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle