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View Structure Prediction Details

Protein: PNT1
Organism: Saccharomyces cerevisiae
Length: 423 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNT1.

Description E-value Query
Range
Subject
Range
PNT1_YEAST - Pentamidine resistance factor, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...
PNT1 - Mitochondrial integral inner membrane protein involved in membrane insertion of C-terminus of Cox2p,...
0.0 [1..423] [1..423]
gi|49641669, gi|... - gi|50305155|ref|XP_452536.1| unnamed protein product [Kluyveromyces lactis], gi|49641669|emb|CAH0138...
gi|49641669, gi|... - gi|5532984|gb|AAD44967.1|AF157501_1 mitochondrial inner membrane protein Pnt1p [Kluyveromyces lactis...
0.0 [70..412] [66..378]

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Predicted Domain #1
Region A:
Residues: [1-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRVALVRK YIAPSVIKSD SIQLHGLVKA PLFKALNSRY KLGSLQIVQD VDWNAKTTPS  60
   61 DSPEPLAATL NSNRSLPMTK FPKQEILEQV KLDTKVGKWR KFMTGWFRIG LYLLKSYKTG 120
  121 IQNTLKVFWD TRNEEQKFSI KNGALANLVR EIEMHEINTR LSSSSLPTSS SAKAPLRPLS 180
  181 INRKTLVELI RRDQIWKLPV FFTLVFIFEE VSVLIFTFFP RVCPYNCLTP GGYKKLSNSY 240
  241 IKGTTSTQGN YGLGPLEFTK QGTIKYEPPY AVPIENLYNF LTSFPQSMIS NWKLYIYKKL 300
  301 KLQKLLCNEI EKIYQYLFID DWLLLQSILN TDVEKTKIAL SDRELVNCIL ERKLYHMGDD 360
  361 LNEMVNDTLG KEILLKRLFL YWTLRYNDTI SLNGKHTFSE KWGVNNISLL KYNSELVATK 420
  421 DIQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle