| Protein: | WTM2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 467 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WTM2.
| Description | E-value | Query Range |
Subject Range |
|
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318.0 | [0..29] | [467..981] |
|
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316.0 | [0..33] | [453..1035] |
|
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315.0 | [0..15] | [455..7] |
|
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315.0 | [0..35] | [453..846] |
|
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313.0 | [0..15] | [467..1204] |
|
|
309.0 | [0..22] | [453..600] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MAKSKSSQGA SGARRKPAPS LYQHISSFKP QFSTRVDDVL HFSKTLTWRS EIIPDKSKGT 60
61 LTTSLLYSQG SDIYEIDTTL PLKTFYDDDD DDDNDDDDEE GNGKTKSAAT PN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.587 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.587 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.568 | b.55.1 | PH domain-like |
| View | Download | 0.559 | d.17.1 | Cystatin/monellin |
| View | Download | 0.528 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.528 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.522 | b.55.1 | PH domain-like |
| View | Download | 0.485 | d.17.1 | Cystatin/monellin |
| View | Download | 0.485 | d.17.1 | Cystatin/monellin |
| View | Download | 0.447 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
|
Region A: Residues: [113-467] |
1 11 21 31 41 51
| | | | | |
1 PEYGDAFQDV EGKPLRPKWI YQGETVAKMQ YLESSDDSTA IAMSKNGSLA WFRDEIKVPV 60
61 HIVQEMMGPA TRYSSIHSLT RPGSLAVSDF DVSTNMDTVV KSQSNGYEED SILKIIDNSD 120
121 RPGDILRTVH VPGTNVAHSV RFFNNHLFAS CSDDNILRFW DTRTADKPLW TLSEPKNGRL 180
181 TSFDSSQVTE NLFVTGFSTG VIKLWDARAV QLATTDLTHR QNGEEPIQNE IAKLFHSGGD 240
241 SVVDILFSQT SATEFVTVGG TGNVYHWDME YSFSRNDDDN EDEVRVAAPE ELQGQCLKFF 300
301 HTGGTRRSSN QFGKRNTVAL HPVINDFVGT VDSDSLVTAY KPFLASDFIG RGYDD
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| Detection Method: | |
| Confidence: | 44.522879 |
| Match: | 1gg2B |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
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