| Protein: | BFR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 470 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BFR1.
| Description | E-value | Query Range |
Subject Range |
|
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8.0E-62 | [2..469] | [915..1404] |
|
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5.0E-61 | [2..469] | [129..618] |
|
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8.0E-61 | [2..469] | [913..1402] |
|
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1.0E-60 | [2..469] | [916..1405] |
|
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2.0E-60 | [2..469] | [914..1403] |
|
|
2.0E-60 | [2..469] | [921..1410] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MSSQQHKFKR PDVSVRDKKL DTLNVQLKKI DTEIGLIRKQ IDQHQVNDTT QQERKKLQDK 60
61 NKEIIKIQAD LKTRRSNIHD SIKQLDAQIK RKNNQIEEKL GKKAKFSSTA EAKQRINEIE 120
121 ESIASGDLSL VQEKLLVKEM QSLNKLIKDL VNIEPIRKSV DADKAKINQL KEELNGLNPK 180
181 DVSNQFEENQ QKLNDIHSKT QGVYDKRQTL FNKRAALYKK RDELYSQIRQ IRADFDNEFK 240
241 SFRAKLDKER LKREEEQRLS KLLEQKDVDM GKLQEKLTHA KIPAFTYEIG AIENSLLVLD 300
301 PTYVKPKKNI LPDLSSNALE TKP
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [324-470] |
1 11 21 31 41 51
| | | | | |
1 ARKVVADDLV LVTPKKDDFV NVAPSKSKKY KKKNQQKNTE NEQPASIFNK VDGKFTLEPT 60
61 LIATLAELDV TVPINSDDVK ITVEQLKKKH EELLSKQEEQ TKQNIESVEK EIEKLNLDYS 120
121 NKEQQVKKEL EEKRLKEQEE SEKDKEN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.584 | 0.145 | budding cell bud growth | a.25.1 | Ferritin-like |
| View | Download | 0.584 | 0.058 | mRNA metabolic process | a.25.1 | Ferritin-like |
| View | Download | 0.596 | 0.042 | budding cell bud growth | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.572 | 0.028 | budding cell bud growth | a.7.1 | Spectrin repeat |
| View | Download | 0.596 | 0.017 | mRNA metabolic process | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.469 | 0.013 | budding cell bud growth | f.1.1 | Colicin |
| View | Download | 0.572 | 0.011 | mRNA metabolic process | a.7.1 | Spectrin repeat |
| View | Download | 0.572 | 0.008 | budding cell bud growth | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.469 | 0.005 | mRNA metabolic process | f.1.1 | Colicin |
| View | Download | 0.572 | 0.003 | mRNA metabolic process | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.468 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.467 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.432 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.413 | N/A | N/A | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.413 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.412 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.376 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.375 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.346 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.336 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.330 | N/A | N/A | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.327 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.324 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.316 | N/A | N/A | b.82.3 | cAMP-binding domain-like |
| View | Download | 0.295 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.290 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.285 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.283 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.271 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.267 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.263 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.263 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.262 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.249 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.244 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.237 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.235 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.217 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.214 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.214 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.208 | N/A | N/A | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.203 | N/A | N/A | a.87.1 | DBL homology domain (DH-domain) |
