Protein: | ULS1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1619 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ULS1.
Description | E-value | Query Range |
Subject Range |
|
568.0 | [0..958] | [1614..387] |
|
561.0 | [0..487] | [1619..293] |
|
556.0 | [0..758] | [1616..90] |
|
554.0 | [0..758] | [1616..8] |
|
551.0 | [0..758] | [1616..90] |
|
549.0 | [0..707] | [1616..2] |
|
549.0 | [0..725] | [1616..56] |
Region A: Residues: [1-91] |
1 11 21 31 41 51 | | | | | | 1 MAAVPTIDLT LADSDNEDIF HSFSSSTSVD KIDIRKENGK LRMAGLEVAQ SNDDAARQAF 60 61 HVFKTNISNN ETFDTILSKS KTITDSTFNN E |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [92-438] |
1 11 21 31 41 51 | | | | | | 1 KSSNEVKQQQ VLKEETMGSS NDEKKTQESS PSAEMIKLFY ENDDVPLSDS FKQKEEGKRI 60 61 NQDEQVKENI CGISSSYVSK DYDGVEDDFE PNTCQDSNLD FQEEKLNLNN KPSQQQFSDP 120 121 ETKDNSLKSE NKDQIKGVTT TSYRDLPIES SAFQDSETQN NSKNTIPNIV NEKRTPALPS 180 181 NLSSVESSLK NETAKVEGKT TVRLPGLQNN VALLEQEQSE LFKHFSEQPV DISDFGRKIK 240 241 RKHSGDFADN KILKRPILPS KNMDHTTHNS HDSEQKNSSI IILSDEDESG AGINDIESPL 300 301 KVSEPNTADA LRSSVPEVIS LLDLPNIDLN NSVIKEASGS NSIPTSE |
Detection Method: | ![]() |
Confidence: | 40.0 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [439-631] |
1 11 21 31 41 51 | | | | | | 1 TDAQSSSSSV LQGTIMTEQA TQSSQHECNS SLDTLKKNHQ KLLKDLNSRE SELRNALSCC 60 61 KTNSEILRRK LSRREKEVSD AEKHWQLLLT SMARGGRTIS STQQILVDEA ENQLNKLKEK 120 121 RQLTKSKLDS INLKMYNYNE QWKSFVHSKN INLQKSLAAL ERSARDSKAS ATVNKRNECL 180 181 AEKEKLDQML KEG |
Detection Method: | ![]() |
Confidence: | 4.522879 |
Match: | 2dfsA |
Description: | No description for 2dfsA was found. |
Region A: Residues: [632-922] |
1 11 21 31 41 51 | | | | | | 1 TLSFSTYKQL TGEIQQKLND LKLGDQRTTD INSVLPIVRQ PLAKRDLFIK SIDTAKDLLA 60 61 KNTSRTEMTK RILYRHLDNL VSYKNFFEDG RSLIDINRRH VAHESAQILF TNGVKMPIVF 120 121 ETLQDYGIKF SNPAIVNPDR RAQYFKSIEV ARDLISKSTR SEDAKRKITR FLNIIEEFRK 180 181 DIDTGFPPTP LKREGVGKAV VGLRQQGLKM DRLYENLRRY KIPITSEELL QQSYLFPVNA 240 241 DQRPPSNWNI VENTEDTSST ANDLSMQDEF HISNMHAAED QEQIRALLEN V |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [923-1442] |
1 11 21 31 41 51 | | | | | | 1 KQSESIIDGE ALTPEDMTVN LLKHQRLGLH WLLQVENSAK KGGLLADDMG LGKTIQAIAL 60 61 MLANRSEESK CKTNLIVAPV SVLRVWKGEL ETKVKKRAKF TTFIFGGSGN GKVKHWRDLA 120 121 RYDAVLVSYQ TLANEFKKHW PKKLDGEQNQ LPAVPHIQAL NRLKTSNEYY SPFFCNDSTF 180 181 YRILLDEGQN IKNKNTRASK ACCTINGMYR WVLSGTPIQN SMDELYSLIR FLRIPPYHKE 240 241 QRFKLDIGRF FQRNKQYQYD NEDRKNALRK VRVLLNAIML RRSKADKIDG KPLLELPPKI 300 301 VEVDESRLKG EELKFYTALE SKNQALAKKL LNNSTRGSYS SVLTLLLRLR QACCHSELVV 360 361 MGEKKAEGTK VANGKSFEDD WLRLYYKITH MSGEAQAQVI TSMNSMTCFW CMEQLEPEAM 420 421 SVLTGCGHLI CDTCIEPFIE ESSMLPQAKK TKGGAFAIPC KDCQRLTNEK DIVSHKLYDQ 480 481 VINQGFTEED LHAEYLSEME KQKIQQKNVY VPNFESLEPS |
Detection Method: | ![]() |
Confidence: | 80.522879 |
Match: | 1z63A |
Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [1443-1619] |
1 11 21 31 41 51 | | | | | | 1 TKIEQCIQVI QRVFDESATE KIIIFSQFTT FFEILEHFLK NKLNFPYLKY IGSMNAQRRS 60 61 DVINEFYRDP EKRILLISMK AGNSGLTLTC ANHVVIVDPF WNPYVEEQAQ DRCYRISQTK 120 121 KVQVHKLFIK DSVEDRISEL QKRKKEMVDS AMDPGKIKEV NSLGRRELGF LFGLNAL |
Detection Method: | ![]() |
Confidence: | 57.30103 |
Match: | 1z5zA |
Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
Matching Structure (courtesy of the PDB):![]() |