| Protein: | ULS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1619 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ULS1.
| Description | E-value | Query Range |
Subject Range |
|
|
568.0 | [0..958] | [1614..387] |
|
|
561.0 | [0..487] | [1619..293] |
|
|
556.0 | [0..758] | [1616..90] |
|
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554.0 | [0..758] | [1616..8] |
|
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551.0 | [0..758] | [1616..90] |
|
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549.0 | [0..707] | [1616..2] |
|
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549.0 | [0..725] | [1616..56] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MAAVPTIDLT LADSDNEDIF HSFSSSTSVD KIDIRKENGK LRMAGLEVAQ SNDDAARQAF 60
61 HVFKTNISNN ETFDTILSKS KTITDSTFNN E
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [92-438] |
1 11 21 31 41 51
| | | | | |
1 KSSNEVKQQQ VLKEETMGSS NDEKKTQESS PSAEMIKLFY ENDDVPLSDS FKQKEEGKRI 60
61 NQDEQVKENI CGISSSYVSK DYDGVEDDFE PNTCQDSNLD FQEEKLNLNN KPSQQQFSDP 120
121 ETKDNSLKSE NKDQIKGVTT TSYRDLPIES SAFQDSETQN NSKNTIPNIV NEKRTPALPS 180
181 NLSSVESSLK NETAKVEGKT TVRLPGLQNN VALLEQEQSE LFKHFSEQPV DISDFGRKIK 240
241 RKHSGDFADN KILKRPILPS KNMDHTTHNS HDSEQKNSSI IILSDEDESG AGINDIESPL 300
301 KVSEPNTADA LRSSVPEVIS LLDLPNIDLN NSVIKEASGS NSIPTSE
|
| Detection Method: | |
| Confidence: | 40.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [439-631] |
1 11 21 31 41 51
| | | | | |
1 TDAQSSSSSV LQGTIMTEQA TQSSQHECNS SLDTLKKNHQ KLLKDLNSRE SELRNALSCC 60
61 KTNSEILRRK LSRREKEVSD AEKHWQLLLT SMARGGRTIS STQQILVDEA ENQLNKLKEK 120
121 RQLTKSKLDS INLKMYNYNE QWKSFVHSKN INLQKSLAAL ERSARDSKAS ATVNKRNECL 180
181 AEKEKLDQML KEG
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [632-922] |
1 11 21 31 41 51
| | | | | |
1 TLSFSTYKQL TGEIQQKLND LKLGDQRTTD INSVLPIVRQ PLAKRDLFIK SIDTAKDLLA 60
61 KNTSRTEMTK RILYRHLDNL VSYKNFFEDG RSLIDINRRH VAHESAQILF TNGVKMPIVF 120
121 ETLQDYGIKF SNPAIVNPDR RAQYFKSIEV ARDLISKSTR SEDAKRKITR FLNIIEEFRK 180
181 DIDTGFPPTP LKREGVGKAV VGLRQQGLKM DRLYENLRRY KIPITSEELL QQSYLFPVNA 240
241 DQRPPSNWNI VENTEDTSST ANDLSMQDEF HISNMHAAED QEQIRALLEN V
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [923-1442] |
1 11 21 31 41 51
| | | | | |
1 KQSESIIDGE ALTPEDMTVN LLKHQRLGLH WLLQVENSAK KGGLLADDMG LGKTIQAIAL 60
61 MLANRSEESK CKTNLIVAPV SVLRVWKGEL ETKVKKRAKF TTFIFGGSGN GKVKHWRDLA 120
121 RYDAVLVSYQ TLANEFKKHW PKKLDGEQNQ LPAVPHIQAL NRLKTSNEYY SPFFCNDSTF 180
181 YRILLDEGQN IKNKNTRASK ACCTINGMYR WVLSGTPIQN SMDELYSLIR FLRIPPYHKE 240
241 QRFKLDIGRF FQRNKQYQYD NEDRKNALRK VRVLLNAIML RRSKADKIDG KPLLELPPKI 300
301 VEVDESRLKG EELKFYTALE SKNQALAKKL LNNSTRGSYS SVLTLLLRLR QACCHSELVV 360
361 MGEKKAEGTK VANGKSFEDD WLRLYYKITH MSGEAQAQVI TSMNSMTCFW CMEQLEPEAM 420
421 SVLTGCGHLI CDTCIEPFIE ESSMLPQAKK TKGGAFAIPC KDCQRLTNEK DIVSHKLYDQ 480
481 VINQGFTEED LHAEYLSEME KQKIQQKNVY VPNFESLEPS
|
| Detection Method: | |
| Confidence: | 80.522879 |
| Match: | 1z63A |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1443-1619] |
1 11 21 31 41 51
| | | | | |
1 TKIEQCIQVI QRVFDESATE KIIIFSQFTT FFEILEHFLK NKLNFPYLKY IGSMNAQRRS 60
61 DVINEFYRDP EKRILLISMK AGNSGLTLTC ANHVVIVDPF WNPYVEEQAQ DRCYRISQTK 120
121 KVQVHKLFIK DSVEDRISEL QKRKKEMVDS AMDPGKIKEV NSLGRRELGF LFGLNAL
|
| Detection Method: | |
| Confidence: | 57.30103 |
| Match: | 1z5zA |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
