| Protein: | SYC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 188 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYC1.
| Description | E-value | Query Range |
Subject Range |
|
|
210.0 | [0..10] | [188..568] |
|
|
201.0 | [0..26] | [187..475] |
|
|
200.0 | [0..26] | [187..524] |
|
|
198.0 | [0..26] | [187..528] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MDLPKDKSDR THQRINLNNS GTDRTNDLYL HIVQTFGCIE TTATENATKL LMLGDVEVEI 60
61 SASSVSIEWT QKSMISQTIA DSIVIMIIGL CASDKNVLSE SELKERNHNV WKIQELQNLF 120
121 REQFGDSFSI DEGIGKKENV KNGSVTIGKS KATIDFSTMK LIDCNSNPLK GRVESILSIG 180
181 QKLTTPLC
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.587 | c.28.1 | Cryptochrome/photolyase, N-terminal domain |
| View | Download | 0.488 | a.211.1 | Description not found. |
| View | Download | 0.476 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.374 | d.163.1 | DNA breaking-rejoining enzymes |
| View | Download | 0.362 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.361 | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.336 | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.325 | a.26.1 | 4-helical cytokines |
| View | Download | 0.217 | c.72.2 | MurD-like peptide ligases, catalytic domain |
