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View Structure Prediction Details

Protein: ORT1
Organism: Saccharomyces cerevisiae
Length: 292 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORT1.

Description E-value Query
Range		 Subject
Range
gi|151942810 - gi|151942810|gb|EDN61156.1| amino acid transporter [Saccharomyces cerevisiae YJM789]
AGC1 - Mitochondrial amino acid transporter, acts both as a glutamate uniporter and as an aspartate-glutama...
AGC1_YEAST - Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...
 2.0E-79 [14..290] [531..811]
UCP3_BOVIN - Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1
 4.0E-79 [1..291] [1..298]
UCP3_PIG - Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1
 8.0E-79 [1..291] [1..295]
UCP3_MOUSE - Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=1 SV=1
 1.0E-78 [1..291] [1..295]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 1.0E-78 [2..290] [183..467]
UCP3_RAT - Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1
 3.0E-78 [1..291] [1..295]
UCP3_CANLF - Mitochondrial uncoupling protein 3 OS=Canis lupus familiaris GN=UCP3 PE=2 SV=1
 3.0E-78 [1..291] [1..298]
gi|15620851 - gi|15620851|dbj|BAB67789.1| KIAA1896 protein [Homo sapiens]
 1.0E-77 [2..290] [274..560]

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Predicted Domain #1
Region A:
Residues: [1-292] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSKKKGLI EGAILDIING SIAGACGKVI EFPFDTVKVR LQTQASNVFP TTWSCIKFTY  60
   61 QNEGIARGFF QGIASPLVGA CLENATLFVS YNQCSKFLEK HTNVFPLGQI LISGGVAGSC 120
  121 ASLVLTPVEL VKCKLQVANL QVASAKTKHT KVLPTIKAII TERGLAGLWQ GQSGTFIRES 180
  181 FGGVAWFATY EIVKKSLKDR HSLDDPKRDE SKIWELLISG GSAGLAFNAS IFPADTVKSV 240
  241 MQTEHISLTN AVKKIFGKFG LKGFYRGLGI TLFRAVPANA AVFYIFETLS AL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.32
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle