Protein: | TCB1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1186 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCB1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1186] | [1..1186] |
|
0.0 | [23..1184] | [87..1260] |
|
0.0 | [14..1177] | [53..1211] |
|
0.0 | [115..930] | [62..871] |
|
0.0 | [115..930] | [20..839] |
|
0.0 | [115..779] | [52..760] |
|
0.0 | [115..950] | [42..960] |
Region A: Residues: [1-80] |
1 11 21 31 41 51 | | | | | | 1 MAKEDTGVTA PKKPETAQVA NINGIDKLEP PKTKEETESS KSVSSEKAAH ASDESFKRSI 60 61 HEASYVGWKQ IGGWEDKDEL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.467 | 0.911 | mitochondrion | a.3.1 | Cytochrome c |
Region A: Residues: [81-370] |
1 11 21 31 41 51 | | | | | | 1 TLDDELMDMT RETFLDNIIP DSLYGDWYHS VAIFFIGGVA SFALGHYKFS MGSAFFVIVI 60 61 TSLLYRTSAK KYRGSIRELV QKEFTVQKVE NDYESLEWLN AFLDKYWPIL EPSVSQLIVQ 120 121 QANEQMATNE AIPKFITQLW IDELTLGVKP PRVDLVKTFQ NTASDVVVMD WGISFTPHDL 180 181 CDMSAKQVRN YVNELAVVKA KIFGITIPVS VSDIAFKAHA RVKFKLMTPF PHVETVNIQL 240 241 LKVPDFDFVA TLFGRSIFNW EILAIPGLMT LIQKMAKKYM GPILLPPFSL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [371-506] |
1 11 21 31 41 51 | | | | | | 1 QLNIPQLLSG SNLSIGILEI TVKNAKGLKR TSSILNESID PYLSFEFNDI SIAKTRTVRD 60 61 TLNPVWDETL YVLLNSFTDP LTISVYDKRA KLKDKVLGRI QYNLNTLHDK TTQRNLKAQF 120 121 LRNSKPVGEL TFDLRF |
Detection Method: | ![]() |
Confidence: | 8.0 |
Match: | 1gmiA_ |
Description: | Domain from protein kinase C epsilon |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [507-640] |
1 11 21 31 41 51 | | | | | | 1 FPTLEEKKLP DGSVEELPDL NTGIAKVVVE EGSRFAEEEQ KVTAYVEVYL NAKLVLTTGK 60 61 ATDTGTLKWN SDYEAVIADR RKTRYKFVVK DGKGEEIGST IQTLNDLIDR SQVNKNLIPL 120 121 KNQKGDIKIT TYWR |
Detection Method: | ![]() |
Confidence: | 118.373389 |
Match: | 1dqvA_ |
Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [641-791] |
1 11 21 31 41 51 | | | | | | 1 PVRLEIGSNS VAYTPPIGAI RVFIEKANDL RNLEKFGTID PYCKVLVNGL SKGRTDFKSQ 60 61 TLNPVWNQVI YVAVTSPNQR ITLQCMDVET VNKDRSLGEF NVNVQDLFKK DENDKYEETI 120 121 DEKAKVGRLV MPKKKPKGTI TYYTSFYPAL P |
Detection Method: | ![]() |
Confidence: | 118.373389 |
Match: | 1dqvA_ |
Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [792-930] |
1 11 21 31 41 51 | | | | | | 1 VLTLEEIQDL DKVNKKKKAL ELRKSAIDEK KISKEDKAKF DQEWNEVKEL EDMYSNRQKL 60 61 DLPELLQYNQ GVLAVTVLNG ELPDSGLYVQ AFFDDNGHPR FVSPRIPSRI VKNGWSGDVI 120 121 IKELDKSITT FRVAKNKNY |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [931-1130] |
1 11 21 31 41 51 | | | | | | 1 NRVEKCVCEV ELPTQELVKN CYYKPSILHL SGEGSAKLML QISWFPIDTK QLPANDLITN 60 61 SGDLTIMSRS AENLIASDLN GYSDPYLKYY INNEEDCAYK TKVVKKTLNP KWNDEGTIQI 120 121 NNRLNDVLRI KVMDWDSTSA DDTIGTAEIP LNKVKVEGTT ELDVPVEGLE NAGQDGGMLH 180 181 LAFSFKPRYT ISVSKREKKV |
Detection Method: | ![]() |
Confidence: | 117.325697 |
Match: | 1dsyA_ |
Description: | C2 domain from protein kinase c (alpha) |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [1131-1186] |
1 11 21 31 41 51 | | | | | | 1 GDIASKGLGT GLKAGTTVIG GGVGAIGKIK KGVFGGLGSL TNHKKNHEMG EEETKF |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.