| Protein: | NRT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 598 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..598] | [1..598] |
|
|
0.0 | [7..523] | [17..540] |
|
|
0.0 | [4..527] | [16..546] |
|
|
0.0 | [3..506] | [68..581] |
|
Region A: Residues: [1-544] |
1 11 21 31 41 51
| | | | | |
1 MSFSSIVSKF LRYLEIPAKN RTAVNFLRNP DLQPIKSANQ TWGFWSNLAY WGAVSFTAGT 60
61 WMSGSAALSV GLSYPETIVS FLLGNVLTII FTMANSYPGY DWKIGFTLAQ RFVFGIYGSA 120
121 FGIIIRILMS IVNYGSNAWL GGLSINMILD SWSHHYLHLP NTLSPSVAMT TKQLVGFIIF 180
181 HVLTALCYFM KPYHMNYLLI WSCVATCFAM LGIVIYLTKN AHGVGELFTS TKSTVTGSKR 240
241 AWAWVYMISY WFGSISPGST NQSDYSRFGS SNLAIWTGSV CALLIPATLV PIFGVISAST 300
301 CDKLYGKQFW MPMDIFDYWL TNNYSAGARA GAFFCGLCFT MSQMSSTISN CGFATGMDMA 360
361 GLLPKYVDIK RGALFCACIS WACLPWNFYN SSSTFLTVMS SFGVVMTPII AVMICDNFLI 420
421 RKRQYSITNA FILKGEYYFT KGVNWRAIVA WVCGMAPGLP GIAWEVNNNY FHDSGIVKFF 480
481 YGDSFFSFLI SFFVYWGLCV FFPFKITVRH DDKDYYGAFT DEEARKKGMI PYSEISEEEI 540
541 RAYT
|
| Detection Method: |  |
| Confidence: | 201.79588 |
| Match: | PF02133 |
| Description: | Permease for cytosine/purines, uracil, thiamine, allantoin |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [545-598] |
1 11 21 31 41 51
| | | | | |
1 LGECYTTGHE YKPESSDNES PELIKTSSEN TNVFEIVHQK DDEKHSFSTT QQVV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
