| Protein: | NRT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 598 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..598] | [1..598] |
|
|
0.0 | [7..523] | [17..540] |
|
|
0.0 | [4..527] | [16..546] |
|
|
0.0 | [3..506] | [68..581] |
|
Region A: Residues: [1-544] |
1 11 21 31 41 51
| | | | | |
1 MSFSSIVSKF LRYLEIPAKN RTAVNFLRNP DLQPIKSANQ TWGFWSNLAY WGAVSFTAGT 60
61 WMSGSAALSV GLSYPETIVS FLLGNVLTII FTMANSYPGY DWKIGFTLAQ RFVFGIYGSA 120
121 FGIIIRILMS IVNYGSNAWL GGLSINMILD SWSHHYLHLP NTLSPSVAMT TKQLVGFIIF 180
181 HVLTALCYFM KPYHMNYLLI WSCVATCFAM LGIVIYLTKN AHGVGELFTS TKSTVTGSKR 240
241 AWAWVYMISY WFGSISPGST NQSDYSRFGS SNLAIWTGSV CALLIPATLV PIFGVISAST 300
301 CDKLYGKQFW MPMDIFDYWL TNNYSAGARA GAFFCGLCFT MSQMSSTISN CGFATGMDMA 360
361 GLLPKYVDIK RGALFCACIS WACLPWNFYN SSSTFLTVMS SFGVVMTPII AVMICDNFLI 420
421 RKRQYSITNA FILKGEYYFT KGVNWRAIVA WVCGMAPGLP GIAWEVNNNY FHDSGIVKFF 480
481 YGDSFFSFLI SFFVYWGLCV FFPFKITVRH DDKDYYGAFT DEEARKKGMI PYSEISEEEI 540
541 RAYT
|
| Detection Method: |  |
| Confidence: | 201.79588 |
| Match: | PF02133 |
| Description: | Permease for cytosine/purines, uracil, thiamine, allantoin |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [545-598] |
1 11 21 31 41 51
| | | | | |
1 LGECYTTGHE YKPESSDNES PELIKTSSEN TNVFEIVHQK DDEKHSFSTT QQVV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.546 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.390 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.571 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.478 | d.58.35 | Pseudouridine synthase |
| View | Download | 0.365 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.348 | g.27.1 | Fibronectin type I module |
| View | Download | 0.335 | d.76.1 | GYF domain |
| View | Download | 0.314 | b.34.2 | SH3-domain |
| View | Download | 0.312 | a.4.1 | Homeodomain-like |
| View | Download | 0.311 | b.34.3 | Myosin S1 fragment, N-terminal domain |
| View | Download | 0.293 | d.68.7 | R3H domain |
| View | Download | 0.277 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.264 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.248 | d.58.17 | Metal-binding domain |
| View | Download | 0.226 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.221 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
