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View Structure Prediction Details

Protein: YOR059C
Organism: Saccharomyces cerevisiae
Length: 450 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR059C.

Description E-value Query
Range
Subject
Range
YOR059C - Hypothetical protein
YO059_YEAST - Putative lipase YOR059C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR059C PE=1 SV=...
0.0 [1..450] [1..450]
gi|28922217, gi|... - gi|32412922|ref|XP_326941.1| predicted protein [Neurospora crassa], gi|28922217|gb|EAA31464.1| conse...
gi|85098994 - gi|85098994|ref|XP_960700.1| hypothetical protein NCU06655 [Neurospora crassa OR74A]
2.0E-68 [3..309] [10..304]
FAM135A - family with sequence similarity 135, member A
1.0E-50 [6..243] [1249..1464]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
5.0E-50 [2..235] [77..318]
gi|222422961, gi... - gi|30696012|ref|NP_851167.1| unknown protein [Arabidopsis thaliana], gi|222422961|dbj|BAH19465.1| AT...
2.0E-49 [2..236] [31..279]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSDKHLFVL IHGLWGNYTH MESMRTILST TLKKEDVNDD MIYFLPKQNA MFKTFDGIEI  60
   61 IGYRTLIEVC EFIRDYKDGK ITKLSVMGYS QGGLVARFMI GKMLTEFKEL FEDIEPQLFI 120
  121 TMATPHLGVE FYNPTGIAYK SALYSALRTL GSTILGKSGR EMFIANSSNN ILVKLSQGEY 180
  181 LEALSLFKWR IAFANVKNDR TVAFYTAFIT DCDPFIDFDN KLKYTFEEKI PGSGYKGILP 240
  241 KIVDLNALNV NSHAPT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.221849
Match: 1eh5A_
Description: Palmitoyl protein thioesterase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 0.685577841077355 bayes_pls_golite062009
catalytic activity 0.629869101256762 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [257-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPTKTYKKWG RTILIILVAT FLILPIALVM NGLGTAYSYI VTCKYRKMLS NGILHNEVRG  60
   61 KLGLTEQLKG YVTDAYGSII NSALDMDANY EASNSNLVNE EELPWKEFIQ KYTTINDGVW 120
  121 KSKFKKLPFD ENRKVILRNL NKLKWIRVPI YIKAVNAHGV IVARRGMDEN TAATGIACIE 180
  181 FTAQLLAYLM HKSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle