Protein: | RSB1 |
Organism: | Saccharomyces cerevisiae |
Length: | 354 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSB1.
Description | E-value | Query Range |
Subject Range |
|
317.0 | [0..1] | [318..1] |
|
314.0 | [0..3] | [279..23] |
|
311.0 | [0..3] | [279..8] |
|
305.0 | [0..2] | [294..10] |
|
281.0 | [0..2] | [290..33] |
|
259.0 | [0..3] | [276..13] |
|
233.0 | [0..3] | [278..22] |
Region A: Residues: [1-183] |
1 11 21 31 41 51 | | | | | | 1 MVPNLRFNIT MIVIWGILLT IHVVQLLMRQ YWFSIAFICT GILEVLGFIG RTWSHSNVAD 60 61 MDAFLLNMIC LTIAPVFTMG GIYYQLAKLI EVYGHRFSLL PSPMAYSFIF ICSDIVSLVV 120 121 QAVGGGLCGV AVTDGTSTTT GNHVFIAGLA IQVASMAIFL MLWFHFLFRI YISVRWEHIN 180 181 SRP |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.894 | a.24.27 | Description not found. |
View | Download | 0.847 | a.238.1 | Description not found. |
View | Download | 0.836 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
View | Download | 0.836 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
View | Download | 0.707 | a.238.1 | Description not found. |
View | Download | 0.696 | a.47.1 | STAT |
View | Download | 0.696 | a.47.1 | STAT |
View | Download | 0.655 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
View | Download | 0.615 | a.47.2 | t-snare proteins |
View | Download | 0.590 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
Region A: Residues: [184-354] |
1 11 21 31 41 51 | | | | | | 1 ISLSLLKISQ TEVDYLYREK FHFLRLEPKR WVFHYFNLAI TVAVLTIFTR CCYRLAELVV 60 61 GWDGYLITHE WYFIILDALM MAIATVTLTI FHPGFAFKGR STSIPITPGH VDPETLPHTD 120 121 DVEDILDTSD SKQFDIEKEE FQASMKYPIS TFKQFMSKIA NLFSSKKKAK L |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.412 | N/A | N/A | a.47.1 | STAT |
View | Download | 0.412 | N/A | N/A | a.47.1 | STAT |
View | Download | 0.384 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
View | Download | 0.382 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
View | Download | 0.355 | N/A | N/A | a.26.1 | 4-helical cytokines |
View | Download | 0.341 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
View | Download | 0.341 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
View | Download | 0.333 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
View | Download | 0.311 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |