| Protein: | CYC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 404 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYC2.
| Description | E-value | Query Range |
Subject Range |
|
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2.0E-81 | [30..399] | [576..895] |
|
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4.0E-81 | [30..399] | [568..885] |
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1.0E-79 | [30..399] | [558..871] |
|
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2.0E-79 | [30..399] | [589..909] |
|
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3.0E-79 | [30..399] | [598..913] |
|
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8.0E-79 | [30..396] | [579..898] |
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1.0E-78 | [30..399] | [566..879] |
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2.0E-78 | [30..399] | [596..910] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MKSENSLNPS EKYNFEECNV LKEPFKNRKE ETKKRKSSML WKNYVLSSSR ITRRLHKSPR 60
61 KSSFSKNFFI TGCLLTVGAV SSYLTYRYTS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.274 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.271 | a.4.12 | TrpR-like |
| View | Download | 0.331 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.393 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.261 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.254 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.254 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.248 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.245 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.220 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.219 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.215 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.202 | d.58.17 | Metal-binding domain |
| View | Download | 0.202 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [91-224] |
1 11 21 31 41 51
| | | | | |
1 ERENKHELSP SYFVKYKISH KRDIDSSHFL LEVTPLFKQK VNIWSLMTAE NLWSVEIKQP 60
61 EVMVVRNYTP LPLKFNPASK EIEILKDGDN ADGKLSFYIK KYENGEVARW LHHLPKGHII 120
121 EIRGPFIDYE FPHL
|
| Detection Method: | |
| Confidence: | 61.045757 |
| Match: | 1ndh__ |
| Description: | cytochrome b5 reductase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [225-404] |
1 11 21 31 41 51
| | | | | |
1 PNELKRSRDC LYMDNRNERG NNVRENSQFI YQPYDIMMFT AGTGIVTALQ LLLTESPFRG 60
61 TIKLFHTDKN IKQLGPLYPI LLRLQASNRV QLKIFETDRQ TKQDVLKSIQ KSITKPYPYK 120
121 GLLPFSNVNN KNIMPVLALV CGPESYISSI SGRKYDLNQG PVGGLLSKEG WNSDNVYKLS 180
181
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| Detection Method: | |
| Confidence: | 61.045757 |
| Match: | 1ndh__ |
| Description: | cytochrome b5 reductase |
| Matching Structure (courtesy of the PDB): |
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