| Protein: | TIR4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 487 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIR4.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-55 | [21..461] | [545..1004] |
|
|
9.0E-52 | [4..483] | [619..1106] |
|
|
7.0E-49 | [30..477] | [531..994] |
|
|
1.0E-48 | [8..482] | [838..1321] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MAYSKITLLA ALAAIAYAQT QAQINELNVV LDDVKTNIAD YITLSYTPNS GFSLDQMPAG 60
61 IMDIAAQLVA NPSDDSYTTL YSEVDFSAVE HMLTMVPWYS SRLLPELEAM DASLTTSSSA 120
121 ATS
|
| Detection Method: |  |
| Confidence: | 36.823909 |
| Match: | PF00660 |
| Description: | Seripauperin and TIP1 family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.790 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.758 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.756 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.708 | N/A | N/A | a.4.3 | ARID-like |
| View | Download | 0.674 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [124-423] |
1 11 21 31 41 51
| | | | | |
1 SSEVASSSIA SSTSSSVAPS SSEVVSSSVA PSSSEVVSSS VAPSSSEVVS SSVASSSSEV 60
61 ASSSVAPSSS EVVSSSVASS SSEVASSSVA PSSSEVVSSS VAPSSSEVVS SSVASSSSEV 120
121 ASSSVAPSSS EVVSSSVASS TSEATSSSAV TSSSAVSSST ESVSSSSVSS SSAVSSSEAV 180
181 SSSPVSSVVS SSAGPASSSV APYNSTIASS SSTAQTSIST IAPYNSTTTT TPASSASSVI 240
241 ISTRNGTTVT ETDNTLVTKE TTVCDYSSTS AVPASTTGYN NSTKVSTATI CSTCKEGTST 300
301
|
| Detection Method: | |
| Confidence: | 12.03 |
| Match: | 1ei3A |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-487] |
1 11 21 31 41 51
| | | | | |
1 ATDFSTLKTT VTVCDSACQA KKSATVVSVQ SKTTGIVEQT ENGAAKAVIG MGAGALAAVA 60
61 AMLL
|
| Detection Method: | |
| Confidence: | 12.23 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [385-487] |
1 11 21 31 41 51
| | | | | |
1 TVCDYSSTSA VPASTTGYNN STKVSTATIC STCKEGTSTA TDFSTLKTTV TVCDSACQAK 60
61 KSATVVSVQS KTTGIVEQTE NGAAKAVIGM GAGALAAVAA MLL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
