| Protein: | SPT20 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 604 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPT20.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..582] | [1..582] |
|
|
0.005 | [176..348] | [89..245] |
|
Region A: Residues: [1-604] |
1 11 21 31 41 51
| | | | | |
1 MSANSPTGND PHVFGIPVNA TPSNMGSPGS PVNVPPPMNP AVANVNHPVM RTNSNSNANE 60
61 GTRTLTREQI QQLQQRQRLL LQQRLLEQQR KQQALQNYEA QFYQMLMTLN KRPKRLYNFV 120
121 EDADSILKKY EQYLHSFEFH IYENNYKICA PANSRLQQQQ KQPELTSDGL ILTKNNETLK 180
181 EFLEYVARGR IPDAIMEVLR DCNIQFYEGN LILQVYDHTN TVDVTPKENK PNLNSSSSPS 240
241 NNNSTQDNSK IQQPSEPNSG VANTGANTAN KKASFKRPRV YRTLLKPNDL TTYYDMMSYA 300
301 DNARFSDSIY QQFESEILTL TKRNLSLSVP LNPYEHRDML EETAFSEPHW DSEKKSFIHE 360
361 HRAESTREGT KGVVGHIEER DEFPQHSSNY EQLMLIMNER TTTITNSTFA VSLTKNAMEI 420
421 ASSSSNGVRG ASSSTSNSAS NTRNNSLANG NQVALAAAAA AAAVGSTMGN DNNQFSRLKF 480
481 IEQWRINKEK RKQQALSANI NPTPFNARIS MTAPLTPQQQ LLQRQQQALE QQQNGGAMKN 540
541 ANKRSGNNAT SNNNNNNNNL DKPKVKRPRK NAKKSESGTP APKKKRMTKK KQSASSTPSS 600
601 TTMS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
