| Protein: | WSC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 556 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WSC3.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-57 | [11..556] | [568..1112] |
|
|
4.0E-55 | [14..555] | [200..748] |
|
|
2.0E-53 | [62..556] | [6..508] |
|
|
6.0E-49 | [16..556] | [250..799] |
|
|
7.0E-48 | [7..556] | [1599..2152] |
|
|
8.0E-36 | [9..535] | [78..607] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MERVWFAKLT NKGTIKIGYI SFILLSLLCQ SLIGLVNADF NYEGCYSAAD IQSAGLSLKN 60
61 SYIYQSVSYC QNQCPESAVV ALFNGSDCYC GNSVSFLTSL TKSTDSNCGT KC
|
| Detection Method: |  |
| Confidence: | 22.251812 |
| Match: | PF01822 |
| Description: | WSC domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-173] |
1 11 21 31 41 51
| | | | | |
1 SGWPYQMCGG SSYMNVYVNA ETFVSSVESS SSKEGSSTSY MPSTTSSLSS AQISSTTRRT 60
61 S
|
| Detection Method: | |
| Confidence: | 11.96 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-475] |
1 11 21 31 41 51
| | | | | |
1 TDMKSSEMIA TTVSTTSTTS SSTSSTTSST TSSTTSSTTS STTSSSTSST TSSTTSSTTS 60
61 STTSSTTSST TSSTTSSTTS STTSIFSVTS SSSSITLSSS EHTTVDSRTS SPSSTLVPVS 120
121 SSSSTLSTPK VTSMTPSTSS TIPIVTSVEL VTSVVTKAIV STSDQHQETI FVTRTSVVER 180
181 SSEVATATAA ASNNRSNSTS KQRLSGGAIA GIVIGVVFGV IFIILILLFL IWRRRKSHDQ 240
241 LDLEETKHYQ PYSFGDEDAN PIGPPPSSGT TNWMRHSRGN TAGSIGTSNM YGFSMSNGAN 300
301 YS
|
| Detection Method: | |
| Confidence: | 12.06 |
| Match: | 1ei3A |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [476-556] |
1 11 21 31 41 51
| | | | | |
1 SPSSNTSGSI INNLAGLQDA TVQKQNLPST VFEEANTLNS ANERFSANSL PDMMMSGPLQ 60
61 VVNPDNPDNP ELSSTVSHNR A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.540 | 0.936 | response to heat | a.4.5 | "Winged helix" DNA-binding domain |
