YRC Public Data Repository - Protein Structure Prediction

Protein:	IZH4
Organism:	Saccharomyces cerevisiae
Length:	312 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IZH4.

Description	E-value	Query Range	Subject Range
paqr-1 - status:Partially_confirmed UniProt:Q94177 protein_id:AAB09107.2	9.0E-67	[7..294]	[121..422]
IZH4_YEAST - ADIPOR-like receptor IZH4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IZH4 PE=1 SV=1 IZH4 - Membrane protein involved in zinc ion homeostasis, member of the four-protein IZH family, expression... gi\|151945532 - gi\|151945532\|gb\|EDN63773.1\| membrane protein involved in zinc metabolism [Saccharomyces cerevisiae Y... gi\|190407249 - gi\|190407249\|gb\|EDV10516.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|207341433 - gi\|207341433\|gb\|EDZ69493.1\| YOL101Cp-like protein [Saccharomyces cerevisiae AWRI1631]	2.0E-63	[1..312]	[1..312]
ADR1_MOUSE - Adiponectin receptor protein 1 OS=Mus musculus GN=Adipor1 PE=1 SV=1	3.0E-60	[41..300]	[93..364]
HHP1_ARATH - Heptahelical transmembrane protein 1 OS=Arabidopsis thaliana GN=HHP1 PE=1 SV=1	8.0E-56	[21..298]	[34..327]
SPAC30D11.11 - Haemolysin-III family protein YAJB_SCHPO - Uncharacterized protein C30D11.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D1...	6.0E-54	[4..291]	[132..427]

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Predicted Domain #1

Region A:
Residues: [1-312]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLTTIEQS PVKCETTTEK ESNDTRGTDS NENAETKETK KGFPFHDLAK LQKQYKNKSS  60
   61 RNESLVALIY LLGSMLSFCL LIFFTDFYLI PLFPTTTTMT DYIVFNFYLL NVFVFCMVHF 120
  121 IYHFVKNISL QQHLEHWQKF SYLSNINLLI SSQITILYYL FYDYVFFFKI FTLLMNFIGL 180
  181 VAYFFILTDK LISSKRFNKT VFFISVSVVC CSLPLLTAII TFDGLENLKE RIKVNAITWE 240
  241 LVALVAASII YVTRFPESLF RRNKKEEGWN HSEYLFHLLI SGTAFYHFFI LIQSYILMHS 300
  301 SLNQPELINF KS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	109.958607
Match:	PF03006
Description:	Haemolysin-III related

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [157-312]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYYLFYDYVF FFKIFTLLMN FIGLVAYFFI LTDKLISSKR FNKTVFFISV SVVCCSLPLL  60
   61 TAIITFDGLE NLKERIKVNA ITWELVALVA ASIIYVTRFP ESLFRRNKKE EGWNHSEYLF 120
  121 HLLISGTAFY HFFILIQSYI LMHSSLNQPE LINFKS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits