| Protein: | MDM20 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 796 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDM20.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..796] | [1..796] |
|
|
0.0 | [18..532] | [25..550] |
|
|
0.0 | [17..542] | [27..593] |
|
|
0.0 | [40..542] | [12..537] |
|
|
0.0 | [116..542] | [1..486] |
|
|
0.0 | [30..542] | [26..632] |
|
Region A: Residues: [1-587] |
1 11 21 31 41 51
| | | | | |
1 MSDKIQEEIL GLVSRSNFKQ CYAKLGQLQK QFPNALYFKI LETYVKFKQS PGKFDYNKLL 60
61 EEPYGLKGTT ITGDTRSLEF LHNFFVELGK YDEALHVYER GNFKFPSYEL SYHWFMKALE 120
121 DSNYNQMSKA SLQLAKYSDS GNLPKRAYYF WNAISILAVS RFQENTLSDP KKILLSRLAR 180
181 QSLLDLKPFQ NVQEIIVYCL VLDELFPQSR EISEEIVAIT FANFDTSVNL YLKNFILKHT 240
241 KLLNSPQKLF EVCSKLIEKG LDDYELITNL IDAAYKLSKS KDEVKQWIDE NLGDSRNTRL 300
301 ARLKLDIMYT DSVSESSLSY YLSKYHNKPC CSIDLNHYSG HINIDMLKSI MSKYDPEDKD 360
361 LIHHCNILEL GLIGSDSINN YNKFKGTLEK KSVTDYSSCS TFLLEIVKDK CKKTNPELKD 420
421 VLLCITILEN YQAKDPHNFD TMCWLIVLYM YLGLVPDAYF HFINLKIKNV QTDSLDYMIF 480
481 SRFSTLFPNK QSDFYSKTFH EHNNLYDTSL ANLPRYIQVA FERNSYSKIL GMLEMRDKLM 540
541 KSYTRWTKTL ENLQFSRLCN DKRGHLLQKL HEDWRSLEMT QSVSFSD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [588-796] |
1 11 21 31 41 51
| | | | | |
1 NRDFSILDEN FAQFLNRGKI LEYANLNEES IFLTLIRELI IEALPNGEKT EQISALLKKL 60
61 PSINLEELLN NNLTEVESAS FLIFFEIYEN NGKNLHDLIS RLMKVPINAK QNWMVSHTYL 120
121 TKMATLKTLD SLKRIKDKEI QKLIKNSLKE LRSCCDDVFK GYSKALVQAY EELKKDECGN 180
181 LLKELDVKAE NVKNIKNSLL GIQKSVRNL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [661-796] |
1 11 21 31 41 51
| | | | | |
1 TEVESASFLI FFEIYENNGK NLHDLISRLM KVPINAKQNW MVSHTYLTKM ATLKTLDSLK 60
61 RIKDKEIQKL IKNSLKELRS CCDDVFKGYS KALVQAYEEL KKDECGNLLK ELDVKAENVK 120
121 NIKNSLLGIQ KSVRNL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.971 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.887 | a.7.7 | BAG domain |
| View | Download | 0.880 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.875 | a.7.7 | BAG domain |
| View | Download | 0.860 | a.24.9 | alpha-catenin/vinculin |
