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Protein Overview: psidin-PA

General Information:
Name(s) found: psidin-PA / FBpp0083238 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene phagocyte signaling impaired is referred to in FlyBase by the symbol Dmel\psidin (CG4845, FBgn0243511). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:15847425..15852207. It has the cytological map location 92C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: binding. There is experimental evidence that it is involved in the biological process</span>: immune response; humoral immune response; activation of immune response; phagocytosis, engulfment. 8 alleles are reported. The phenotypes of these alleles are annotated with: larval hemocyte; hemocyte; melanotic mass. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 948 amino acids

    Gene Ontology:
    Cellular Component: lysosome [IDA]
    Biological Process: immune response [IMP]
    phagocytosis, engulfment [IMP]
    humoral immune response [IMP]
    activation of immune response [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQQGMDSA LFERRLRPVY DNLEVGNNRK ALQESEKLLR KHPNLLCARA LKGLSLLRLG  60
   61 RYDESHGCLQ TVAEEKPTDD STLQVLSFCY REMEQLDKIV ELYQHAVKQN PGNEELLAHL 120
  121 FISHVRVEDY KAQQAVALQL YKAQPKNAYY FWSVISVVFQ GIRGPESALP EKRKIYLGLA 180
  181 QRMVDKHIKE GKMETEQEAF LYLHILKLQN KYQEAWEFLT GELCAKLYPG APVSMKFELL 240
  241 KELGNWRELN ELLQQLLDAD RDRWDFYKEY IQSSFELLKL TPQGVENGDK DSLARCQEFL 300
  301 QRIIDSSERK KRGPYLARLE LHQRMRAEQL PAEKLIGDFD EMVIEYFRLF GDKSCCTHDI 360
  361 ALFLPSISMN QRQALASKLL LESGVTSTSL PKNKEQLQKH LCALQISRMC GSHMDLPADH 420
  421 LLAFYTALKL HYEHGRTTFG KKLLATEMGP SDAYALLAAN VMYDLSRREN KSDHLFEALC 480
  481 LLQYVLRNST SNFHVKLLSL KIYHLFGCQV GAQEMYEYLD IKQIQLDSMG YVHCQLLALG 540
  541 GRFSGNRNVY DATLKFFTNS YKERLEYIAL TYRFCTFSKM EEFMNFKERL TNSLQYVACS 600
  601 VEAQICDLVS CYGNITQNLS AYVAMSIEPA EDRIAWHELS DNRDLGAIIR WDPLHEVDAA 660
  661 EERRESFDQE VEVLQVRSLM LRLFASFIDL YHGAGLKDSP AGAETATLEL LRESWTGLFQ 720
  721 RLRVMNYKPL AQKFLVNLLP TRLHLLLDMP YERFFDDLAQ LVLDLQSGSA KLAEQCKRVG 780
  781 DNVIATMELC VQTINESNES NGIDGLWKRR GQQQKVAASL EMLSLYAFLL SVLNDKLQVS 840
  841 SKTKTKKKPV ENKVDGPQPI SEKERSQMLQ ELMRQLKHKF EACDTAIRSW KAPVLPRDLS 900
  901 SFMSDMSLKP EVEATLIGDV SATFKDSHEL MVTELRNLLK DKIRMVAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] PSI-BLAST 53.522879 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [73..729] PSI-BLAST 4.69897 Clathrin D6 Coat
    3 View Details [730..948] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle