| Protein: | YOL075C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1294 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOL075C.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [4..1293] | [138..1505] |
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0.0 | [1..1292] | [121..1492] |
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0.0 | [39..1291] | [141..1473] |
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0.0 | [4..1292] | [135..1481] |
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0.0 | [20..1291] | [139..1477] |
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0.0 | [37..1287] | [177..1487] |
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Region A: Residues: [1-281] |
1 11 21 31 41 51
| | | | | |
1 MSQQENGDVA TELIENRLSF SRIPRISLHV RDLSIVASKT NTTLVNTFSM DLPSGSVMAV 60
61 MGGSGSGKTT LLNVLASKIS GGLTHNGSIR YVLEDTGSEP NETEPKRAHL DGQDHPIQKH 120
121 VIMAYLPQQD VLSPRLTCRE TLKFAADLKL NSSERTKKLM VEQLIEELGL KDCADTLVGD 180
181 NSHRGLSGGE KRRLSIGTQM ISNPSIMFLD EPTTGLDAYS AFLVIKTLKK LAKEDGRTFI 240
241 MSIHQPRSDI LFLLDQVCIL SKGNVVYCDK MDNTIPYFES I
|
| Detection Method: |  |
| Confidence: | 232.29073 |
| Match: | 1l2tA_ |
| Description: | MJ0796 |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [282-352] |
1 11 21 31 41 51
| | | | | |
1 GYHVPQLVNP ADYFIDLSSV DSRSDKEEAA TQSRLNSLID HWHDYERTHL QLQAESYISN 60
61 ATEIQIQNMT T
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.618 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.565 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.572 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.614 | a.7.7 | BAG domain |
| View | Download | 0.790 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.544 | a.112.1 | Description not found. |
| View | Download | 0.537 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.527 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.509 | a.112.1 | Description not found. |
| View | Download | 0.494 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.493 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.477 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.477 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.470 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.469 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.457 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.454 | a.112.1 | Description not found. |
| View | Download | 0.444 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.444 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.432 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.428 | a.4.1 | Homeodomain-like |
| View | Download | 0.419 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.418 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.417 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.417 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.408 | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.404 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.401 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.401 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.396 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.392 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.387 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.382 | a.17.1 | p8-MTCP1 |
| View | Download | 0.382 | a.126.1 | Serum albumin-like |
| View | Download | 0.381 | a.101.1 | Uteroglobin-like |
| View | Download | 0.372 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.371 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.370 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.365 | a.47.2 | t-snare proteins |
| View | Download | 0.364 | a.47.2 | t-snare proteins |
| View | Download | 0.362 | a.47.2 | t-snare proteins |
| View | Download | 0.355 | a.112.1 | Description not found. |
| View | Download | 0.349 | d.34.1 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| View | Download | 0.344 | a.126.1 | Serum albumin-like |
| View | Download | 0.342 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.342 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.340 | a.105.1 | FIS-like |
| View | Download | 0.337 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.336 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.332 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.330 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.323 | a.77.1 | DEATH domain |
| View | Download | 0.314 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.305 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.305 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.302 | a.47.2 | t-snare proteins |
| View | Download | 0.299 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.299 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.294 | a.77.1 | DEATH domain |
| View | Download | 0.294 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.292 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.288 | a.39.1 | EF-hand |
| View | Download | 0.286 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.285 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.285 | a.17.1 | p8-MTCP1 |
| View | Download | 0.281 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.281 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.276 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.269 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.256 | a.47.2 | t-snare proteins |
| View | Download | 0.256 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.253 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.250 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.248 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.245 | a.47.2 | t-snare proteins |
| View | Download | 0.244 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.244 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.243 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.242 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.241 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.239 | a.7.7 | BAG domain |
| View | Download | 0.238 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.235 | d.64.1 | eIF1-like |
| View | Download | 0.234 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.233 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.232 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.232 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.230 | a.30.1 | ROP protein |
| View | Download | 0.230 | a.30.1 | ROP protein |
| View | Download | 0.230 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.228 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.225 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.224 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.223 | a.46.1 | Methionine synthase domain |
| View | Download | 0.221 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.221 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.221 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.220 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.220 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.219 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.218 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.217 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.215 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.214 | a.21.1 | HMG-box |
| View | Download | 0.214 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.213 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.212 | d.201.1 | SRP19 |
| View | Download | 0.211 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.210 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.208 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.207 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.206 | a.47.2 | t-snare proteins |
| View | Download | 0.206 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.204 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.202 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.201 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
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Region A: Residues: [353-453] |
1 11 21 31 41 51
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1 RLPFWKQVTV LTRRNFKLNF SDYVTLISTF AEPLIIGTVC GWIYYKPDKS SIGGLRTTTA 60
61 CLYASTILQC YLYLLFDTYR LCEQDIALYD RERAEGSVTP L
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Region B: Residues: [476-676] |
1 11 21 31 41 51
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1 VSITYFMFGL EADARKFFYQ FAVVFLCQLS CSGLSMLSVA VSRDFSKASL VGNMTFTVLS 60
61 MGCGFFVNAK VMPVYVRWIK YIAFTWYSFG TLMSSTFTNS YCTTDNLDEC LGNQILEVYG 120
121 FPRNWITVPA VVLLCWSVGY FVVGAIILYL HKIDITLQNE VKSKQKKIKK KSPTGMKPEI 180
181 QLLDDVYHQK DLEAEKGKNI H
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| Detection Method: | |
| Confidence: | 151.457575 |
| Match: | 1jsqA_ |
| Description: | MsbA |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [454-475] |
1 11 21 31 41 51
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1 AFIVARKISL FLSDDFAMTM IF
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Region B: Residues: [677-942] |
1 11 21 31 41 51
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1 ITIKLEDIDL RVIFSAPFSN WKEGNFHHET KEILQSVNAI FKPGMINAIM GPSGSGKSSL 60
61 LNLISGRLKS SVFAKFDTSG SIMFNDIQVS ELMFKNVCSY VSQDDDHLLA ALTVKETLKY 120
121 AAALRLHHLT EAERMERTDN LIRSLGLKHC ENNIIGNEFV KGISGGEKRR VTMGVQLLND 180
181 PPILLLDEPT SGLDSFTSAT ILEILEKLCR EQGKTIIITI HQPRSELFKR FGNVLLLAKS 240
241 GRTAFNGSPD EMIAYFTELG YNCPSF
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| Detection Method: | |
| Confidence: | 151.457575 |
| Match: | 1jsqA_ |
| Description: | MsbA |
| Matching Structure (courtesy of the PDB): |
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Region A: Residues: [943-1238] |
1 11 21 31 41 51
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1 TNVADFFLDL ISVNTQNEQN EISSRARVEK ILSAWKANMD NESLSPTPIS EKQQYSQESF 60
61 FTEYSEFVRK PANLVLAYIV NVKRQFTTTR RSFDSLMARI AQIPGLGVIF ALFFAPVKHN 120
121 YTSISNRLGL AQESTALYFV GMLGNLACYP TERDYFYEEY NDNVYGIAPF FLAYMTLELP 180
181 LSALASVLYA VFTVLACGLP RTAGNFFATV YCSFIVTCCG ERLGIMTNTF FERPGFVVNC 240
241 ISIILSIGTQ MSGLMSLGMS RVLKGFNYLN PVGYTSMIII NFAFPGNLKL TCEDGG
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [1239-1294] |
1 11 21 31 41 51
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1 KNSDGTCEFA NGHDVLVSYG LVRNTQKYLG IIVCVAIIYR LIAFFILKAK LEWIKW
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.397 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.480 | d.42.1 | POZ domain |
| View | Download | 0.441 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.687 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.432 | d.42.1 | POZ domain |
| View | Download | 0.369 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.341 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.336 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.314 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.313 | a.4.1 | Homeodomain-like |
| View | Download | 0.295 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.288 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.288 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.279 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.270 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.261 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.229 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.228 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.216 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.210 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.204 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.200 | d.15.1 | Ubiquitin-like |
