| Protein: | PLB3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 686 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLB3.
| Description | E-value | Query Range |
Subject Range |
|
|
893.0 | [0..13] | [650..7] |
|
|
886.0 | [0..24] | [602..20] |
|
|
875.0 | [0..10] | [592..9] |
|
|
850.0 | [0..10] | [608..6] |
|
|
837.0 | [0..10] | [608..6] |
|
|
805.0 | [0..2] | [604..1] |
|
Region A: Residues: [1-368] |
1 11 21 31 41 51
| | | | | |
1 MIRPLCSKII ISYIFAISQF LLAANAWSPT DSYVPGTVSC PDDINLVREA TSISQNESAW 60
61 LEKRNKVTSV ALKDFLTRAT ANFSDSSEVL SKLFNDGNSE NLPKIAVAVS GGGYRSMLTG 120
121 AGVLAAMDNR TEGAYEHGLG GLLQSTTYLS GASGGNWLVG TLALNNWTSV QDILNNMQND 180
181 DSIWDLSDSI VTPGGINIFK TAKRWDHISN AVESKQNADY NTSLADIWGR ALAYNFFPSL 240
241 NRGGIGLTWS SIRDFPVFQN AEMPFPISVA DGRYPGTKVI NLNATVFEFN PFEMGSWDPS 300
301 LNSFANVKYL GTNVSNGVPL ERGKCTAGFD NAGFIMGTSS TLFNQFLLRI NSTHLPSFIT 360
361 RLARHFLK
|
| Detection Method: |  |
| Confidence: | 136.156545 |
| Match: | 1cjyA |
| Description: | Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [369-613] |
1 11 21 31 41 51
| | | | | |
1 DLSQDFNDIA VYSPNPFKDT KFLDSDYTTS IVDSDSLFLV DGGEDDENVP VLPLIQKERD 60
61 VDIIFAVDNS ADMRLAWPDG SSLVHTYERQ FVKQGQGMSF PYVPDTNTFV NLGLNKKPTF 120
121 FGCDANNLTD LQYIPPLVVY LPNAEYSFNS NQSAFKLSYS ESQRRSMIQN GFEIATRNNF 180
181 TDDPEFMGCV GCAIIRRKQQ ALNITLPPEC ETCFKNYCWN GTLDTTPLPD VEKDVHHSFI 240
241 NVNSF
|
| Detection Method: | |
| Confidence: | 13.75 |
| Match: | |
| Description: | No description for 1cjyA was found. |
|
Region A: Residues: [614-686] |
1 11 21 31 41 51
| | | | | |
1 NSSIGQEESL YAGSSASQSS SSSSSSSSSS EIPSATATLE KKAATNSGSH LSGISVKFSA 60
61 MIMLTLLMFT GAV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.472 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.459 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.457 | a.130.1 | Chorismate mutase II |
| View | Download | 0.457 | a.130.1 | Chorismate mutase II |
| View | Download | 0.438 | a.1.1 | Globin-like |
| View | Download | 0.414 | a.8.11 | Description not found. |
| View | Download | 0.403 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.393 | a.64.1 | Saposin |
| View | Download | 0.393 | a.64.1 | Saposin |
| View | Download | 0.354 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
