| Protein: | IZH2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 327 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IZH2.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-87 | [16..318] | [59..363] |
|
|
5.0E-83 | [16..317] | [127..426] |
|
|
3.0E-68 | [15..317] | [1..350] |
|
|
2.0E-67 | [11..319] | [1..312] |
|
|
3.0E-67 | [26..318] | [27..316] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MLHVGEESFQ MSTLLERTKS VQELKKRAAG KTSANPAEVA KAKKVLRRLY SWDEIPEWQR 60
61 DNDFILHGYV KE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.538 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.730 | a.2.3 | Chaperone J-domain |
| View | Download | 0.616 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.597 | a.2.7 | tRNA-binding arm |
| View | Download | 0.638 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.530 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.492 | a.2.7 | tRNA-binding arm |
| View | Download | 0.461 | a.2.7 | tRNA-binding arm |
| View | Download | 0.453 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.441 | a.47.2 | t-snare proteins |
| View | Download | 0.430 | a.28.1 | ACP-like |
| View | Download | 0.426 | a.7.7 | BAG domain |
| View | Download | 0.425 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.412 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.407 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.396 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.383 | a.17.1 | p8-MTCP1 |
| View | Download | 0.373 | a.4.1 | Homeodomain-like |
| View | Download | 0.372 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.370 | a.2.7 | tRNA-binding arm |
| View | Download | 0.368 | a.2.7 | tRNA-binding arm |
| View | Download | 0.363 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.355 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.353 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.350 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.348 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.343 | a.2.3 | Chaperone J-domain |
| View | Download | 0.337 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.336 | a.2.7 | tRNA-binding arm |
| View | Download | 0.323 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.319 | a.2.7 | tRNA-binding arm |
| View | Download | 0.315 | a.4.1 | Homeodomain-like |
| View | Download | 0.307 | a.74.1 | Cyclin-like |
| View | Download | 0.307 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.307 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.306 | a.4.1 | Homeodomain-like |
| View | Download | 0.303 | a.28.1 | ACP-like |
| View | Download | 0.302 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.291 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.283 | a.126.1 | Serum albumin-like |
| View | Download | 0.281 | a.47.2 | t-snare proteins |
| View | Download | 0.275 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.274 | a.2.7 | tRNA-binding arm |
| View | Download | 0.272 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.266 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.265 | a.7.7 | BAG domain |
| View | Download | 0.265 | a.7.7 | BAG domain |
| View | Download | 0.262 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.255 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.255 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.252 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.251 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.250 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.248 | a.4.1 | Homeodomain-like |
| View | Download | 0.248 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.244 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.244 | a.118.1 | ARM repeat |
| View | Download | 0.244 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.244 | a.2.7 | tRNA-binding arm |
| View | Download | 0.242 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.238 | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.238 | a.2.7 | tRNA-binding arm |
| View | Download | 0.236 | a.30.1 | ROP protein |
| View | Download | 0.236 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.235 | a.2.7 | tRNA-binding arm |
| View | Download | 0.234 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.232 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.231 | a.2.7 | tRNA-binding arm |
| View | Download | 0.229 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.228 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.226 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.220 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.216 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.216 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.210 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.206 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.204 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.202 | a.4.1 | Homeodomain-like |
| View | Download | 0.200 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
|
Region A: Residues: [73-327] |
1 11 21 31 41 51
| | | | | |
1 TSSFIETFKS LFYLHNESVN IYSHLIPALG FFTVLLLDKS TIKVFATTTW LDHMVIDLFY 60
61 SGAFACLILS SSFHCLKSHS LRIATLGNKL DYLGICILIV TSMVSILYYG YFEKFSLFCL 120
121 FALITVSFGI ACSIVSLKDK FRKREWRPYR AGLFVCFGLS SIIPIFSGLY CYSFSEIWTQ 180
181 IQLFWVLLGG VLYIIGAVLY GMRFPEKICP GKFDIWGHSH QLFHFLVVIA ALCHLRGLLN 240
241 SYELVHIKME NGIVS
|
| Detection Method: | |
| Confidence: | 126.39794 |
| Match: | PF03006 |
| Description: | Haemolysin-III related |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
