| Protein: | COQ2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 372 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COQ2.
| Description | E-value | Query Range |
Subject Range |
|
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7.0E-64 | [1..372] | [1..372] |
|
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3.0E-61 | [27..367] | [6..345] |
|
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2.0E-60 | [34..363] | [80..403] |
|
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4.0E-58 | [30..367] | [30..360] |
|
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6.0E-56 | [45..366] | [32..353] |
|
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3.0E-55 | [53..366] | [8..326] |
|
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2.0E-54 | [50..371] | [10..328] |
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1.0E-52 | [33..369] | [11..354] |
|
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7.0E-52 | [54..366] | [3..320] |
|
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1.0E-51 | [43..363] | [25..330] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MFIWQRKSIL LGRSILGSGR VTVAGIIGSS RKRYTSSSSS SSSPSSKESA PVFTSKELEV 60
61 ARKERLDGLG PFVSRLPKKW IPYAELMRLE KPVG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.708 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.735 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.735 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.708 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.621 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.492 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.473 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.473 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.450 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.428 | a.21.1 | HMG-box |
| View | Download | 0.427 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.411 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.404 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.392 | c.55.4 | Translational machinery components |
| View | Download | 0.361 | a.29.2 | Bromodomain |
| View | Download | 0.359 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.351 | a.64.1 | Saposin |
| View | Download | 0.343 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.336 | a.21.1 | HMG-box |
| View | Download | 0.332 | a.7.8 | GAT domain |
| View | Download | 0.325 | a.77.1 | DEATH domain |
| View | Download | 0.323 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.277 | d.222.1 | YbaB-like |
| View | Download | 0.276 | a.7.1 | Spectrin repeat |
| View | Download | 0.272 | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.265 | b.1.1 | Immunoglobulin |
| View | Download | 0.260 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.254 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.253 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.245 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.235 | d.175.1 | Penicillin binding protein dimerisation domain |
| View | Download | 0.231 | b.12.1 | Lipase/lipooxygenase domain (PLAT/LH2 domain) |
| View | Download | 0.224 | a.24.4 | Hemerythrin |
| View | Download | 0.217 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.213 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.209 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.207 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.204 | b.12.1 | Lipase/lipooxygenase domain (PLAT/LH2 domain) |
| View | Download | 0.204 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [95-372] |
1 11 21 31 41 51
| | | | | |
1 TWLLYLPCSW SILMGAMMQG ATLSATAGML GIFGVGALVM RGAGCTINDF LDRKLDQRVI 60
61 RSVERPIASG RVSPRRALVF LGAQTLVGMG VLSLLPAQCW WLGLASLPIV FTYPLFKRFT 120
121 YYPQAALSAC FNWGALLGFP AMGVMSWPTM IPLYLSSYLW CMTYDTIYAH QDKKFDIKAG 180
181 IKSTALAWGP RTKSIMKAMS ASQIALLAVA GLNSGLLWGP GFIGGLGVFA YRLFSMIKKV 240
241 DLDNPKNCWK YFNANINTGL YFTYALAVDY ILRLFGFL
|
| Detection Method: | |
| Confidence: | 75.508638 |
| Match: | PF01040 |
| Description: | UbiA prenyltransferase family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [266-372] |
1 11 21 31 41 51
| | | | | |
1 DKKFDIKAGI KSTALAWGPR TKSIMKAMSA SQIALLAVAG LNSGLLWGPG FIGGLGVFAY 60
61 RLFSMIKKVD LDNPKNCWKY FNANINTGLY FTYALAVDYI LRLFGFL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
