Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNL313C.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..904] | [1..904] |
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0.0 | [19..904] | [30..822] |
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3.0E-92 | [10..897] | [48..876] |
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5.0E-91 | [11..817] | [326..1102] |
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8.0E-87 | [11..817] | [326..1156] |
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Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 METLLHAKLL LSAEVESLKS GSFDQTYVKK AEHIISGESY QLVQQFVDKF KGKISISGEI 60
61 STSSVIAALN DFLNVEVFKM GQENEMLFLA IALLQTFIQN NYTGP
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.463 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.443 | a.65.1 | Annexin |
| View | Download | 0.549 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.439 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.437 | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.398 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.393 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.391 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.374 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.371 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.357 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.353 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.336 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.333 | a.39.1 | EF-hand |
| View | Download | 0.329 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.324 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.308 | a.1.1 | Globin-like |
| View | Download | 0.304 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.303 | a.3.1 | Cytochrome c |
| View | Download | 0.292 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.291 | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.279 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.274 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.271 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.261 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.257 | a.1.1 | Globin-like |
| View | Download | 0.257 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.256 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.248 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.238 | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.238 | a.112.1 | Description not found. |
| View | Download | 0.233 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.226 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.226 | a.1.1 | Globin-like |
| View | Download | 0.222 | d.6.1 | Prion-like |
| View | Download | 0.221 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.219 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.216 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.216 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.216 | a.24.4 | Hemerythrin |
| View | Download | 0.213 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.210 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.209 | a.4.1 | Homeodomain-like |
| View | Download | 0.206 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.205 | a.26.1 | 4-helical cytokines |
| View | Download | 0.204 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.202 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.201 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.200 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
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Region A: Residues: [106-485] |
1 11 21 31 41 51
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1 AARLKAISGL FGKTGIEIGA VNTALSRSLA IMGQPAYEFM DDPLYLVLSL LLLERITGQK 60
61 SLFDVTPDQE IPLPIISAES TPGLLAVAYW WWARALLTQL SLIPEPSGFQ ASVASAIYQS 120
121 ADLAYAITKE LPESIHEDFK RELCAMYYLE NVKCSLAINT EHLCLPSLTR AKKITNFEFV 180
181 MTGARATRTK YQQKAHAGLI ILAKSFTFQN FALRTTSATP ETFALESDLL LEKPHFESIA 240
241 DEPLDEQIYS KRQKVDLNEG YEEDKLLPLA LRQENIPKLL LDLNPNDQPT LSDYDNIQLL 300
301 LRLYTIKNTT PAKDPLVEEE LTALLSRILY QNGDKNWSIF ARSLWERSII ETTKAKTIER 360
361 GLLQMQSLVE ELDLKIKSKL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [486-563] |
1 11 21 31 41 51
| | | | | |
1 VPSSSEINVA SRLSYIHQLP FIPRWQLDAT LAEKYMSLGI LKSAVEIYER LGMACETALC 60
61 YAAVGDEKKA EEILLQRI
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| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1b89A_ |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [564-685] |
1 11 21 31 41 51
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1 NENDSDARAY SILGDIKQDP SLWEKSWEIG KYVNAKNSLA KYYFNPPPKS GAQPNYSATL 60
61 KHLNDSLRQY PLSFETWYFY GCVGLQCGKM QIAAEAFTRC VSLDPYHALS WSNLSAAYTK 120
121 MD
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| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [686-760] |
1 11 21 31 41 51
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1 KLKEAYSCLK RAISCDAQKN WKIWENYMLV AVKLNEWEDV LTACKQLVSI RRDKSGEGSI 60
61 DLPIIEKLVE LLVTS
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| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [761-832] |
1 11 21 31 41 51
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1 EYPEEPQQLS YFQKSCTEFI CNTLPQVITT SARCWRLVAR VELWRKRPWA ALECHEKAYR 60
61 AISHNPDLEV EE
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| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [833-904] |
1 11 21 31 41 51
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1 KVWNDTVDAC EDLVAAYESL GEMEGKYGPG SLVCKDWKYK CRSTIKALMS KGKGRWDDSP 60
61 GWDRLVEARS QI
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| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1fchA_ |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
