| Protein: | WSC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 503 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WSC2.
| Description | E-value | Query Range |
Subject Range |
|
|
199.0 | [0..15] | [458..46] |
|
|
197.0 | [0..15] | [483..215] |
|
|
196.0 | [0..5] | [486..601] |
|
|
183.0 | [0..6] | [460..688] |
|
|
180.0 | [0..3] | [501..1015] |
|
|
176.0 | [0..2] | [472..1593] |
|
|
170.0 | [0..5] | [466..179] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MHLDLIHKSF ILVWLIYIRA ALADQFTYKA CYSASDIRKL GLTYKGVYEY QSVSYCQNEC 60
61 PGQAVVALFN GTGCYCGGSV AQLQSLTQVD SSKCDVSCAG WPYQNCGG
|
| Detection Method: |  |
| Confidence: | 38.119186 |
| Match: | PF01822 |
| Description: | WSC domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.719 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.719 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.571 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.556 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.512 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.491 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.453 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.414 | N/A | N/A | d.243.1 | Description not found. |
| View | Download | 0.390 | N/A | N/A | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.383 | N/A | N/A | a.74.1 | Cyclin-like |
|
Region A: Residues: [109-188] |
1 11 21 31 41 51
| | | | | |
1 SSAMNVYINN AASTADSTSS TATSTSTTSS SSTSVSSKTS TKLDTKTSTS SSATHSSSSS 60
61 STTSTTTSSS ETTTSSSSSS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.536 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.529 | b.1.18 | E set domains |
| View | Download | 0.529 | b.1.18 | E set domains |
| View | Download | 0.501 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.501 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.469 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.434 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.405 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.389 | d.58.17 | Metal-binding domain |
|
Region A: Residues: [189-503] |
1 11 21 31 41 51
| | | | | |
1 SSSSTSTTST TSTTSSTTST SSSPSTTSSS TSASSSSETS STQATSSSTT STSSSTSTAT 60
61 VTSTPSSTSI GTSTHYTTRV VTQSVVSQAN QQASTIFTTR TSVYATVSST SSSTSSLLNG 120
121 KSSSSKSKGL SGGAIAGVVV GVVCGTVALL ALALFFFVWK KRRQSSQHVD LEETKQYQPY 180
181 SLGDADANPV IPPSASSTNW HIPSRNNTAL SKNTASTFAT YDLPTRAPGG RDSIITGDAH 240
241 NISKRSHFPS VVYEEPPSIY NGNQRFSATS LPDMMEERQL HIVNPDNVSS NIGSNVSDGD 300
301 DDYDDAKDSN NSSLR
|
| Detection Method: | |
| Confidence: | 12.62 |
| Match: | |
| Description: | No description for 1ei3A was found. |
