| Protein: | SEC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 759 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-71 | [1..759] | [1..759] |
|
|
7.0E-68 | [3..720] | [884..1620] |
|
|
1.0E-67 | [3..720] | [881..1617] |
|
|
6.0E-67 | [5..720] | [877..1611] |
|
|
3.0E-66 | [2..759] | [224..974] |
|
|
4.0E-66 | [3..720] | [882..1618] |
|
|
1.0E-65 | [3..720] | [874..1610] |
|
Region A: Residues: [1-302] |
1 11 21 31 41 51
| | | | | |
1 MDASEEAKRV SIQVTSLSTQ LIESVDKQSH LEEQLNKSLK TIASQKAAIE NYNQLKEDYN 60
61 TLKRELSDRD DEVKRLREDI AKENELRTKA EEEADKLNKE VEDLTASLFD EANNMVADAR 120
121 KEKYAIEILN KRLTEQLREK DTLLDTLTLQ LKNLKKVMHS LDNESTVTNN SNRYSTILSD 180
181 SATSSSTSLN KVPTSYSLAS QDIYSGIVYS PSISSIRYDI SLYNEFLKFV AALPRCENIK 240
241 ATSTESKLIR RLVNDEIQPI LKIDNASGIG WLVKKTLLSL IIDGLVVVEP LSGVNATYQI 300
301 GY
|
| Detection Method: |  |
| Confidence: | 14.522879 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [303-456] |
1 11 21 31 41 51
| | | | | |
1 NSSSPAKQAT SNMPKMFKFP LDSPPVAVHA ACSFCGESRD DIIEHARMYI LKTLHKTDDG 60
61 KEQVTNTYPL CHWCLLKLRQ TCEIFAFLRS LKVGAWHLEK LTTQNITKED LEKFSEVTKH 120
121 TKRDGRVSSQ DKKTKRLSFM AGLGINSSTK NKPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [457-759] |
1 11 21 31 41 51
| | | | | |
1 MEIFSSETNA KPGQPTTNIQ RAWLQLCKLR CILHWTHIGI WAVDDSISSK IGPLVEDDSD 60
61 EDQNDAISVR LQDKALWKQD AKRPFSSSSA EESQKSDAFD FESGDMENEI TGESSSDESS 120
121 SDGSSTDNST ADSSSEDESS LADSTTSSAD SSSPESIDNG EGDDTVTKDD KSSIKSANNN 180
181 EENSDCGDKK GRSIIKKKAP QRKIQKKKLL QDLDDLEEQF REESAIDQTE FENAESNVKQ 240
241 NISSKRASSG DENSKKDNNE KTLKTNLTIG DKTQEQIGEN SPSSGLHASS SNDDNFDDAQ 300
301 EQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [567-759] |
1 11 21 31 41 51
| | | | | |
1 TGESSSDESS SDGSSTDNST ADSSSEDESS LADSTTSSAD SSSPESIDNG EGDDTVTKDD 60
61 KSSIKSANNN EENSDCGDKK GRSIIKKKAP QRKIQKKKLL QDLDDLEEQF REESAIDQTE 120
121 FENAESNVKQ NISSKRASSG DENSKKDNNE KTLKTNLTIG DKTQEQIGEN SPSSGLHASS 180
181 SNDDNFDDAQ EQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
