| Protein: | ALP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 573 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..573] | [1..573] |
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|
0.0 | [13..571] | [35..571] |
|
Region A: Residues: [1-573] |
1 11 21 31 41 51
| | | | | |
1 MDETVNIQMS KEGQYEINSS SIIKEEEFVD EQYSGENVTK AITTERKVED DAAKETESSP 60
61 QERREVKRKL KQRHIGMIAL GGTIGTGLII GIGPPLAHAG PVGALISYLF MGTVIYSVTQ 120
121 SLGEMVTFIP VTSSFSVFAQ RFLSPALGAT NGYMYWLSWC FTFALELSVL GKVIQYWTEA 180
181 VPLAAWIVIF WCLLTSMNMF PVKYYGEFEF CIASIKVIAL LGFIIFSFCV VCGAGQSDGP 240
241 IGFRYWRNPG AWGPGIISSD KNEGRFLGWV SSLINAAFTY QGTELVGITA GEAANPRKAL 300
301 PRAIKKVVVR ILVFYILSLF FIGLLVPYND PKLDSDGIFV SSSPFMISIE NSGTKVLPDI 360
361 FNAVVLITIL SAGNSNVYIG SRVLYSLSKN SLAPRFLSNV TRGGVPYFSV LSTSVFGFLA 420
421 FLEVSAGSGK AFNWLLNITG VAGFFAWLLI SFSHIRFMQA IRKRGISRDD LPYKAQMMPF 480
481 LAYYASFFIA LIVLIQGFTA FAPTFQPIDF VAAYISIFLF LAIWLSFQVW FKCRLLWKLQ 540
541 DIDIDSDRRQ IEELVWIEPE CKTRWQRVWD VLS
|
| Detection Method: |  |
| Confidence: | 267.013228 |
| Match: | PF00324 |
| Description: | Amino acid permease |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [65-573] |
1 11 21 31 41 51
| | | | | |
1 EVKRKLKQRH IGMIALGGTI GTGLIIGIGP PLAHAGPVGA LISYLFMGTV IYSVTQSLGE 60
61 MVTFIPVTSS FSVFAQRFLS PALGATNGYM YWLSWCFTFA LELSVLGKVI QYWTEAVPLA 120
121 AWIVIFWCLL TSMNMFPVKY YGEFEFCIAS IKVIALLGFI IFSFCVVCGA GQSDGPIGFR 180
181 YWRNPGAWGP GIISSDKNEG RFLGWVSSLI NAAFTYQGTE LVGITAGEAA NPRKALPRAI 240
241 KKVVVRILVF YILSLFFIGL LVPYNDPKLD SDGIFVSSSP FMISIENSGT KVLPDIFNAV 300
301 VLITILSAGN SNVYIGSRVL YSLSKNSLAP RFLSNVTRGG VPYFSVLSTS VFGFLAFLEV 360
361 SAGSGKAFNW LLNITGVAGF FAWLLISFSH IRFMQAIRKR GISRDDLPYK AQMMPFLAYY 420
421 ASFFIALIVL IQGFTAFAPT FQPIDFVAAY ISIFLFLAIW LSFQVWFKCR LLWKLQDIDI 480
481 DSDRRQIEEL VWIEPECKTR WQRVWDVLS
|
| Detection Method: | |
| Confidence: | 1.57 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
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