| Protein: | PDR16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 351 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDR16.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-78 | [1..351] | [1..351] |
|
|
1.0E-69 | [10..326] | [18..339] |
|
|
5.0E-68 | [3..323] | [22..351] |
|
|
2.0E-65 | [3..325] | [22..354] |
|
Region A: Residues: [1-57] |
1 11 21 31 41 51
| | | | | |
1 MFKRFSKKKE APEDPKNLIN IDKPIKELPA SIAIPKEKPL TGEQQKMYDE VLKHFSN
|
|
Region B: Residues: [113-351] |
1 11 21 31 41 51
| | | | | |
1 AWRREFGISH LGEEHGDKIT ADLVAVENES GKQVILGYEN DARPILYLKP GRQNTKTSHR 60
61 QVQHLVFMLE RVIDFMPAGQ DSLALLIDFK DYPDVPKVPG NSKIPPIGVG KEVLHILQTH 120
121 YPERLGKALL TNIPWLAWTF LKLIHPFIDP LTREKLVFDE PFVKYVPKNE LDSLYGGDLK 180
181 FKYNHDVYWP ALVETAREKR DHYFKRFQSF GGIVGLSEVD LRGTHEKLLY PVKSESSTV
|
| Detection Method: |  |
| Confidence: | 139.68867 |
| Match: | 1aua__ |
| Description: | N-terminal domain of phosphatidylinositol transfer protein sec14p; C-terminal domain of phosphatidylinositol transfer protein sec14p |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phospholipid transporter activity | 4.82372291869245 | bayes_pls_golite062009 |
| lipid transporter activity | 3.44932625048477 | bayes_pls_golite062009 |
| phosphatidylinositol transporter activity | 3.08477039249457 | bayes_pls_golite062009 |
| binding | 1.41701101210975 | bayes_pls_golite062009 |
| transporter activity | 1.00447017621654 | bayes_pls_golite062009 |
| vitamin binding | 0.87942237566918 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.658164745879483 | bayes_pls_golite062009 |
| vitamin E binding | 0.425230876259729 | bayes_pls_golite062009 |
| protein binding | 0.132818074687599 | bayes_pls_golite062009 |
|
Region A: Residues: [58-112] |
1 11 21 31 41 51
| | | | | |
1 PDLKVYTSEK NKSEDDLKPL EEEEKAWLTR ECFLRYLRAT KWVLKDCIDR ITMTL
|
| Detection Method: | |
| Confidence: | 139.68867 |
| Match: | 1aua__ |
| Description: | N-terminal domain of phosphatidylinositol transfer protein sec14p; C-terminal domain of phosphatidylinositol transfer protein sec14p |
| Matching Structure (courtesy of the PDB): |
|
