| Protein: | NPR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 790 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..781] | [1..781] |
|
|
0.0 | [102..781] | [19..744] |
|
|
0.0 | [75..758] | [19..692] |
|
|
0.0 | [389..790] | [12..389] |
|
|
0.0 | [397..790] | [14..384] |
|
|
0.0 | [394..790] | [11..385] |
|
|
0.0 | [414..790] | [15..369] |
|
|
0.0 | [402..790] | [3..369] |
|
Region A: Residues: [1-393] |
1 11 21 31 41 51
| | | | | |
1 MSSLTRLLQE KRKNETSNSS PRTSADTLTT TPESQSLDLH SRNKSSSHIG SVSNSSSSDR 60
61 NRANVPVPGS VTTVTQIYSE EDSSSTAGSS LDDRNQFSSS FLNANFAHTA SFYGTSAQSR 120
121 DRFGSLINDQ GTAGLSSHGG SFAAQNRITS RLSTTSHTSG RAIPSLSSSI PYSVPNSNKD 180
181 NNSSNSNSSS LSSSWLETYA GGMPNNISAI DSNVISSPKV DSVEPRFVIS KQKLQKASMD 240
241 SNNANATQSR SISRSGSFSS QLGNFFFSKN SKESSNSNSA GMSFSANSNG PSPNIKNPNV 300
301 TNGSTPIPKP IRARQSSIYS ASRQPTGSYT DNFYGSPSSV HDHLPPSQSV PRSQHSSIGD 360
361 LKRFFKKSSN SNLSSNSNNV IPNGSPLSSG IAV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [394-519] |
1 11 21 31 41 51
| | | | | |
1 PSHSHSSSHF AAGNNSYSTS YNGNGDTIYS HSHGGSGIPF SKRYIKTGAD LGAGAGGSVK 60
61 LAQRISDNKI FAVKEFRTKF ENESKRDYVK KITSEYCIGT TLNHPNIIET IEIVYENDRI 120
121 LQVMEY
|
| Detection Method: | |
| Confidence: | 323.0103 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.21098426118693 | bayes_pls_golite062009 |
| protein binding | 1.98649667547181 | bayes_pls_golite062009 |
|
Region A: Residues: [520-601] |
1 11 21 31 41 51
| | | | | |
1 CEYDLFAIVM SNKMSYEEIC CCFKQILTGV QYLHSIGLAH RDLKLDNCVI NEKGIVKLID 60
61 FGAAVVFSYP FSKNLVEASG IV
|
|
Region B: Residues: [744-790] |
1 11 21 31 41 51
| | | | | |
1 SIDMCHLVED GLSFKVVRGE DHHHTQVDQS EAHIAGLEKK KKKQNNQ
|
| Detection Method: | |
| Confidence: | 323.0103 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.89056165975555 | bayes_pls_golite062009 |
| protein kinase activity | 2.1541160468938 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.10717018320227 | bayes_pls_golite062009 |
| kinase activity | 1.87492648294538 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.55827408748345 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 1.55379052459468 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| protein binding | 1.12583111976692 | bayes_pls_golite062009 |
| transferase activity | 1.02325581375333 | bayes_pls_golite062009 |
| nucleic acid binding | 0.00700909073980904 | bayes_pls_golite062009 |
|
Region A: Residues: [602-652] |
1 11 21 31 41 51
| | | | | |
1 GSDPYLAPEV CIFAKYDPRP VDIWSSAIIF ACMILKKFPW KIPKLRDNSF K
|
| Detection Method: | |
| Confidence: | 323.0103 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [653-743] |
1 11 21 31 41 51
| | | | | |
1 LFCSGRDCDS LSSLVTRTPD PPSYDESHST EKKKPESSSN NVSDPNNVNI GPQRLLHSLP 60
61 EETQHIVGRM IDLAPACRGN IEEIMEDPWI R
|
| Detection Method: | |
| Confidence: | 323.0103 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
