| Protein: | IPI3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 555 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPI3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..552] | [917..1467] |
|
|
0.0 | [18..529] | [830..1257] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MDEQVIFTTN TSGTIASVHS FEQINLRQCS TQSRNSCVQV GNKYLFIAQA QKALINVYNL 60
61 SGSFKRESVE QRLPLPEILK CLEVVENDGV QYDRIQGVNH NLPDFNLPYL LLGSTESGKL 120
121 YIWELNSGIL LNVKPMAHYQ SITKIKSILN GKYIITSGND SRVIIWQ
|
| Detection Method: |  |
| Confidence: | 56.522879 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-555] |
1 11 21 31 41 51
| | | | | |
1 TVDLVSASND DPKPLCILHD HTLPVTDFQV SSSQGKFLSC TDTKLFTVSQ DATIRCYDLS 60
61 LIGSKKKQKA NENDVSIGKT PVLLATFTTP YSIKSIVLDP ADRACYIGTA EGCFSLNLFY 120
121 KLKGNAIVNL LQSAGVNTVQ KGRVFSLVQR NSLTGGENED LDALYAMGQL VCENVLNSNV 180
181 SCLEISMDGT LLLIGDTEGK VSIAEIYSKQ IIRTIQTLTT SQDSVGEVTN LLTNPYRLER 240
241 GNLLFEGESK GKQPSNNNGH NFMKIPNLQR VIFDGKNKGH LHDIWYQIGE PEAETDPNLA 300
301 LPLNDFNAYL EQVKTQESIF SHIGKVSSNV KVIDNKIDAT SSLDSNAAKD EEITELKTNI 360
361 EALTHAYKEL RDMHEKLYEE HQQMLDKQ
|
| Detection Method: | |
| Confidence: | 52.221849 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
