| Protein: | INP52 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1183 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INP52.
| Description | E-value | Query Range |
Subject Range |
|
|
1165.0 | [0..1] | [1101..1] |
|
|
1034.0 | [0..30] | [1171..32] |
|
|
1025.0 | [0..30] | [1171..32] |
|
|
1004.0 | [0..15] | [1178..21] |
|
Region A: Residues: [1-475] |
1 11 21 31 41 51
| | | | | |
1 MKILLSKQQT RKIAIVSETH GLVFRPINSK NSRRSTCAVE LVPKAELNGN GFRRLSNHEI 60
61 YGFIGLIEIE GLMFIATITG KSKVAQPIPN KTVNKIYAVD FFCLNNSKWD FMDIDSSGYP 120
121 IVTNDGDFAI SSPPSISTHS SRSSLRSSSS RSLNAQEQAP KHPCHELRKL LSNGSFYYST 180
181 DFDLTCTLQK RGFTEHSLSF DDFDREFMWN SFLMDEIITY RDRLDVTAKE LLDQRGFLTT 240
241 VIRGFAETIF SYINRLKVGL TIISRQSWKR AGTRFNARGI DDDGHVANFV ETEMIMYSSQ 300
301 YCYAFTQIRG SLPIFWEQDT SLISPKIQIT RSVEATQPTF DEHFIRLFKK YGPVHIINLL 360
361 STKSSEIQLS RRYKEQLKNS EKMKIGRDVF LTSFDFHRET SQDGFAAASR IIPKIRNTIL 420
421 DAGYFSYDVK EGRLISEQDG VFRTNCLDCL DRTNLIQQTI SLAVFKLFLE DFRLV
|
| Detection Method: |  |
| Confidence: | 183.337242 |
| Match: | PF02383 |
| Description: | SacI homology domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [476-559] |
1 11 21 31 41 51
| | | | | |
1 KPSSFIDDNE FVQKVNALWA DNGDQISQIY TGTNALKSSY SRKGKMSFSG ALSDATKSVS 60
61 RMYINNFVDK GKQQNIDTLL GKLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.833 | a.8.11 | Description not found. |
|
Region A: Residues: [560-938] |
1 11 21 31 41 51
| | | | | |
1 HQQVVELYDP ICEYVNERLL ESEEKFTTHS NINLFVGTFN VNGNSRRADL SKWLFPIGDK 60
61 FKPDVVVLGL QEVIELTAGS ILNADYTKSS FWETMVTDCL NQYEEKYLLL RVEQMSSLLI 120
121 LFFARSDRAY NIKEVGGSTK KTGFGGITGN KGAVAIRFDY GATSFCFVNT HLSAGASNID 180
181 ERRNDYNNIY RNITFPRSKT IPHHDSLFWL GDLNYRITLT NDEVRRELRA QKDGYIDRLL 240
241 QYDQLTQEIN EGVVFQGFKE PTLQFRPTYK YDYGTDNYDT SEKARTPSWT DRIIYKGENL 300
301 HPLAYSDAPL KISDHKPVYA AYRANVKFVD EKEKLNLVEK LYAEYKNTHP EALTTGPDEL 360
361 SHARMEKQKE SIPLDATVQ
|
| Detection Method: | |
| Confidence: | 904.9897 |
| Match: | 1i9yA |
| Description: | Synaptojanin, IPP5C domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [939-1183] |
1 11 21 31 41 51
| | | | | |
1 SAGIKLIDLD DTSSCVSPLL SGPSPQPSVV GPGGLSNVSP DKSKLNVLPP PPPTSRHNKE 60
61 PSSKLLSPTK EISIVSVSPR KGESNLPALE RHSTPKPLPP VPALSLSKPV SLQKSSSELQ 120
121 HAKETIDNGK IVPRPCPPIR RKSSTAPDEI STSTKNSGVS TTEDPEPAKA STKPEKPPVV 180
181 KKPHYLSVAA NKLNTSQEHS IKVSPSNSKS EEELPCKKKS KPKVPAKNPE LEKLSVHPLK 240
241 PCDPN
|
| Detection Method: | |
| Confidence: | 11.26 |
| Match: | |
| Description: | No description for 1deqA was found. |
