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View Structure Prediction Details

Protein: NCE103
Organism: Saccharomyces cerevisiae
Length: 221 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCE103.

Description E-value Query
Range		 Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 1.0E-70 [1..220] [106..327]
BCA1_ARATH - Beta carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana GN=BCA1 PE=1 SV=2
 8.0E-70 [1..219] [111..331]
CAHC_TOBAC - Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
 6.0E-69 [1..220] [98..317]
gi|3061271 - gi|3061271|dbj|BAA25639.1| NPCA1 [Nicotiana paniculata]
 2.0E-68 [1..220] [99..318]
CAHC_SPIOL - Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
 2.0E-67 [1..220] [96..315]
gi|4754913 - gi|4754913|gb|AAD29049.1|AF132854_1 carbonic anhydrase isoform 1 [Gossypium hirsutum]
 2.0E-67 [1..219] [97..317]
CAHC_PEA - Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1
 4.0E-67 [1..219] [102..323]

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Predicted Domain #1
Region A:
Residues: [1-47] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATESSSIF TLSHNSNLQD ILAANAKWAS QMNNIQPTLF PDHNAKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 285.30103
Match: 1ddzA_
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.96380803089124 bayes_pls_golite062009
catalytic activity 1.85658156053797 bayes_pls_golite062009
binding 1.32962036184517 bayes_pls_golite062009
carbon-oxygen lyase activity 0.678762427493332 bayes_pls_golite062009
hydro-lyase activity 0.661217808517883 bayes_pls_golite062009
lyase activity 0.656288524484184 bayes_pls_golite062009
protein binding 0.132818074687599 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [48-221] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSPHTLFIGC SDSRYNENCL GVLPGEVFTW KNVANICHSE DLTLKATLEF AIICLKVNKV  60
   61 IICGHTDCGG IKTCLTNQRE ALPKVNCSHL YKYLDDIDTM YHEESQNLIH LKTQREKSHY 120
  121 LSHCNVKRQF NRIIENPTVQ TAVQNGELQV YGLLYNVEDG LLQTVSTYTK VTPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 285.30103
Match: 1ddzA_
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle