| Protein: | ARK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 638 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARK1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..485] | [73..537] |
|
|
0.0 | [3..506] | [62..547] |
|
|
0.0 | [1..485] | [85..549] |
|
|
0.0 | [3..474] | [62..513] |
|
|
0.0 | [4..484] | [70..538] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MNQPQIGTYN VGTQLTVGSH QVEIIKYLTS GGFAQVYSAL INPPDPHSNS SVACLKRVIV 60
61 PDKPSLNTLR
|
|
Region B: Residues: [89-110] |
1 11 21 31 41 51
| | | | | |
1 IDSHAAKAML HNGSYEVFVL ME
|
| Detection Method: |  |
| Confidence: | 221.741366 |
| Match: | 2phkA_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [71-88] |
1 11 21 31 41 51
| | | | | |
1 AEVDAMRLLK NNRYVVSY
|
|
Region B: Residues: [111-335] |
1 11 21 31 41 51
| | | | | |
1 YCERGGLIDF MNTRLQNRLH EFEILQIMSQ VTQGVAAMHA LQPPLIHRDI KIENVLISAN 60
61 NEYKLCDFGS VCGIIRPPRN SQELSYVQQD ILKNTTAQYR SPEMIDTFRG LPIDEKSDIW 120
121 ALGIFLYKLC YYTTPFEKGG DLAILSGKFE FPLYPNYSEQ LKGLIRDILV QDPRHRPNVY 180
181 QLLKRISIMQ NVPCPINDIQ VVQAPSSHLN LTELHQLSAT QNILS
|
| Detection Method: | |
| Confidence: | 221.741366 |
| Match: | 2phkA_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-414] |
1 11 21 31 41 51
| | | | | |
1 LNSPTTMENT MPNATFQISM ADNTTTAQMH PNRKPSQIAY DASFSNSAKG SQPLFDKSQN 60
61 MYHALDPPLV EPLASSVSN
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1cdlA_ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [415-521] |
1 11 21 31 41 51
| | | | | |
1 NDNELKANSA TKLKQAIVSE AHTFRQNNSI DFPLQNIIPQ YEDSSSSSDE SYSGDVDELK 60
61 KTRSLGSYST RGNIKKNQSV KESLTSSSLP GTSFTPTSTK VNLKHEN
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1cdlA_ |
| Description: | Calmodulin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [522-638] |
1 11 21 31 41 51
| | | | | |
1 SPFKSTFVNT IDNSKDDLNK PSYEDLDVSK QNLKNSIQQR MIDKLNSSEE SFNARKMSKV 60
61 KLHEKGEIDK PTMLKSSGPI SKDKKTKPTP PPKPSHLKPK PPPKPLLLAG RKLSLDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
