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View Structure Prediction Details

Protein: FET4
Organism: Saccharomyces cerevisiae
Length: 552 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FET4.

Description E-value Query
Range
Subject
Range
FET4 - Low-affinity Fe(II) transporter of the plasma membrane
FET4_YEAST - Low-affinity Fe(2+) transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FE...
0.0 [1..552] [1..552]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [1..552] [1..552]
FET4_SCHPO - Low-affinity iron/zinc ion transport protein fet4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...
SPBP26C9.03c - iron ion transporter
0.0 [3..537] [76..570]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKIAEFLGN PGARPDVHHR APTVDCKQYE EFGDSNDYKN DDVVRVVSHS DESTDDELCN  60
   61 VNLTETGAIF TSKGFTGLSK GFTDKTLDFL VRVAGSQAVF FIVWIILIIW VVIGIVYNAP 120
  121 FNWQVVMQDG QSIQSYVWDT LLMRQQLMST HEQILICGRL KSRLASFKNY LTRSTPEEEK 180
  181 ADCTVEANE

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.46
Match: 1itwA
Description: Monomeric isocitrate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [190-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSSVENHIDP SAINGELPVE NWYDRLSNVA SRYMGSIAAM VIFWIGIFVW IGCGAIPKDA  60
   61 GNTPPYTGET TGSNPRLKKF SDAWQMYINT AVAVSLLICT TFLQNIRARH DYFTGRFLVD 120
  121 IFDMDEKIDY RIRKHFNDFE 

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.46
Match: 1itwA
Description: Monomeric isocitrate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [330-552]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPHPVVTIES KKRSTGRKMI DWYADIIGTG IGVLIGVAVF ATWIGIGSPM KWDDNWWLII  60
   61 GTYTGLIGFL DGFVLREVYF RIVQHEEKNY SDVAKEDLEL FQELGIECPE EFSGKAPEIN 120
  121 TIGYRTSQYI NRICSTPWSV LVSVIIIIGL ICIASGLRWS TTGQLIANTP TMIIEEFFLL 180
  181 VLLQAHNWAD RQRRVEVTAL YARRRILLSY VEKRFPEVMM LEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle