YRC Public Data Repository - Protein Structure Prediction

Protein:	GLC8
Organism:	Saccharomyces cerevisiae
Length:	229 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLC8.

Description	E-value	Query Range	Subject Range
gi\|190408537 - gi\|190408537\|gb\|EDV11802.1\| protein phosphatase 1 regulator [Saccharomyces cerevisiae RM11-1a] gi\|207342027 - gi\|207342027\|gb\|EDZ69915.1\| YMR311Cp-like protein [Saccharomyces cerevisiae AWRI1631] GLC8_YEAST - Protein GLC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLC8 PE=1 SV=1 gi\|151946020 - gi\|151946020\|gb\|EDN64252.1\| protein phosphatase 1 regulatory subunit [Saccharomyces cerevisiae YJM78... GLC8 - Regulatory subunit of protein phosphatase 1 (Glc7p), involved in glycogen metabolism and chromosome ...	5.0E-93	[1..229]	[1..229]
gi\|85100563 - gi\|85100563\|ref\|XP_960989.1\| hypothetical protein [Neurospora crassa OR74A] gi\|32421615, gi\|... - gi\|32421615\|ref\|XP_331251.1\| predicted protein [Neurospora crassa], gi\|28922524\|gb\|EAA31753.1\| predi...	6.0E-36	[89..205]	[113..275]
IPP2_MOUSE - Protein phosphatase inhibitor 2 OS=Mus musculus GN=Ppp1r2 PE=1 SV=3	0.008	[57..201]	[12..150]

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Predicted Domain #1

Region A:
Residues: [1-88]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGILKNPLA LSPEQLAQQD PETLEEFRRQ VYENTQKNAK LTSHKRNIPG LDNTKEEGEI  60
   61 IGTSSTFLPK DTLSLKHEQD MLAKMTPE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [89-229]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERVQWNQRNL AENEITKKQF QDIHIDEPKT PYQGAVDPHG EYYRVDDDED EDNSDKKPCQ  60
   61 VANDDIDDLS LGEPEFEIKE NKQPDFETND ENDEDSPEAR HKKFEEMRKK HYDVRAIFNK 120
  121 KSREALKDED EDEDDSTTKE P

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits