| Protein: | UBP15 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1230 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP15.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1230] | [1..1230] |
|
|
0.0 | [15..1230] | [27..1115] |
|
|
0.0 | [33..1230] | [62..1102] |
|
|
0.0 | [21..1230] | [30..1108] |
|
|
0.0 | [21..1229] | [33..1129] |
|
|
0.0 | [27..1218] | [90..1153] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MSSEDELGSI GTVFPGSPID KSIGSILPQF DEEVETLLED SFTWNIPDWN ELTNPKYNSP 60
61 RFRIGDFEWD ILLFPQGNHN KGVAVYLEPH PEEKLDETTG EMVPVDPDWY CCAQFAIGIS 120
121 RPGNGDTINL INKSHHRFNA LDTDWGFANL IDLNNLKHPS KGRPLSFLNE GTLNITAYVR 180
181 ILKDPTGVLW HNFLN
|
| Detection Method: |  |
| Confidence: | 15.30103 |
| Match: | PF00917 |
| Description: | MATH domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [196-241] |
1 11 21 31 41 51
| | | | | |
1 YDSKKVTGYV GFRNQGATCY LNSLLQSYFF TKYFRKLVYE IPTEHE
|
| Detection Method: | |
| Confidence: | 12.60206 |
| Match: | PF00442 |
| Description: | No description for PF00442 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [242-437] |
1 11 21 31 41 51
| | | | | |
1 SPNNSVPLAL QRAFYQLQVS DIPLDTLELT RSFGWDTAES FTQHDVQELN RILMDRLENN 60
61 MKGTPVEGKL NEIFVGKMKS YIKCINVDYE SARVEDFWDL QLNVKNFKNL QESFDNYIEM 120
121 ELMNGENQYA AQDYGLQDAQ KGVIFESFPP VLHLQLKRFE YDFNYDQMVK VNDKYEFPET 180
181 IDLSPFVDKD VLKKTL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [438-541] |
1 11 21 31 41 51
| | | | | |
1 DSENKDKNPY VYNLHGVLVH SGDISTGHYY TLIKPGVEDQ WYRFDDERVW RVTKKQVFQE 60
61 NFGCDRLPDE KVRTMTRGEY QNYIIQRHTS AYMLVYIRQE QEED
|
| Detection Method: | |
| Confidence: | 30.187087 |
| Match: | PF00443 |
| Description: | Ubiquitin carboxyl-terminal hydrolase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [542-885] |
1 11 21 31 41 51
| | | | | |
1 LLRPVLESDV PKHVITRVRE EIKERETKEK EIREAHLYVT LRLHSIKEFI HYEGFDYFAH 60
61 DGFRLFAEEL NDSGLQQINL KVLRTTKLSD IFASIKETMN IPQERDVKYW KMDYRRNSTL 120
121 RLTQPINFES VNITLQEALK KEKKRTMQTQ YGEEGVASTE EDDKALLETV SFLDLFIEEP 180
181 YLELQFLNKL KEASLISKAQ LDDELISTIR TNLPELTKGG IEPVFATDNK SNLLFVKSYD 240
241 PHTQKLLGFG HFAVNQLQQL SDISAIIEDS ISSNEKLTFY EEVQPGTINE IYMKETIYDA 300
301 DIDTGDIVSF EVPGAVLPDT FPVYATIKDF YSYLRYRVKL KFSK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [886-1230] |
1 11 21 31 41 51
| | | | | |
1 FDGSSEEYGV SNEIPESFEF WISAYAPYDD LARMVSKYAH VKPEYLKIIA LYSNGRFVLK 60
61 STSLLNDYLL KDFNCDQIPP FAFEVLSVPL KELERLRPIK LYWLKNSYIH YQCFEFEVAN 120
121 DYTESQFLEK VQHKIGFTDE EKENILLWTN TNFQFQGLLS DQNTFKDVSK HSLLFGRILP 180
181 EESKLFKELN RLENVQTSSL EDFMDDENAT DRPMDDEQDL GMAIEHSEDM KGRIVVVQQY 240
241 FKDLENRHGI SFLFNLIPDE TFPKTKDRLH AKFGLGQKEF SKIKLSIGYS TEEGTVFRSL 300
301 QGFSDEELDK VILYDIMSNL DYIYMDHPDR LRSHSSYDRP MIIKN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
