| Protein: | HAS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 505 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..505] | [1..505] |
|
|
0.0 | [4..427] | [183..619] |
|
|
0.0 | [4..426] | [142..577] |
|
|
0.0 | [4..426] | [142..577] |
|
|
0.0 | [4..427] | [183..619] |
|
|
0.0 | [2..493] | [68..569] |
|
Region A: Residues: [1-259] |
1 11 21 31 41 51
| | | | | |
1 MATPSNKRSR DSESTEEPVV DEKSTSKQNN AAPEGEQTTC VEKFEELKLS QPTLKAIEKM 60
61 GFTTMTSVQA RTIPPLLAGR DVLGAAKTGS GKTLAFLIPA IELLHSLKFK PRNGTGIIVI 120
121 TPTRELALQI FGVARELMEF HSQTFGIVIG GANRRQEAEK LMKGVNMLIA TPGRLLDHLQ 180
181 NTKGFVFKNL KALIIDEADR ILEIGFEDEM RQIIKILPNE DRQSMLFSAT QTTKVEDLAR 240
241 ISLRPGPLFI NVVPETDNS
|
| Detection Method: |  |
| Confidence: | 549.218487 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [260-410] |
1 11 21 31 41 51
| | | | | |
1 TADGLEQGYV VCDSDKRFLL LFSFLKRNQK KKIIVFLSSC NSVKYYAELL NYIDLPVLEL 60
61 HGKQKQQKRT NTFFEFCNAE RGILICTDVA ARGLDIPAVD WIIQFDPPDD PRDYIHRVGR 120
121 TARGTKGKGK SLMFLTPNEL GFLRYLKASK V
|
| Detection Method: | |
| Confidence: | 549.218487 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [411-505] |
1 11 21 31 41 51
| | | | | |
1 PLNEYEFPEN KIANVQSQLE KLIKSNYYLH QTAKDGYRSY LQAYASHSLK TVYQIDKLDL 60
61 AKVAKSYGFP VPPKVNITIG ASGKTPNTKR RKTHK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
