| Protein: | YMR259C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1420 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR259C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [73..1420] | [1..1348] |
|
|
0.0 | [114..992] | [102..1036] |
|
|
0.0 | [117..985] | [413..1452] |
|
|
0.0 | [313..856] | [153..672] |
|
|
0.0 | [596..1028] | [257..665] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MTTDVQFSSQ EIELFRVKEF LIANNPAKIN NENKDAVLTQ IEHDFRYLIQ YIKDGLPNLN 60
61 ESTRLIFPDT FSICLLRSHQ IIASKKIDSQ EFLSAVKEQL LTEANANIIF EYVLDFWADG 120
121 GAPLMNALRD LFSKLLNLLK ITYPMSTLKD VLFNWMNEIL EV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [163-304] |
1 11 21 31 41 51
| | | | | |
1 PSTLRVQYYL IDALSSDFDL YYIIEKKPHF IDNSFSLMNS DLLANSVGKC IVSLLLNIYE 60
61 KHFKKNESFV QEWIQLWKSC ALKYIHDKQY TKSINLYIMI PLFKNMPNSA FTLFLECMSN 120
121 KDPSLLLSLL KIGQELGIEE EP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [305-889] |
1 11 21 31 41 51
| | | | | |
1 FCDNKYTTVD SVNKLIEQDE YKLQVFEILT FSTKKSKPIR PFVFKTIKQY LYVFFVDTEL 60
61 ERRNYFCSSM KHFIFRTRDC AYSLARDARK LKKAEKFPDE QREKLAQVEE ARAFLVWLCN 120
121 FIKYNLAPGT LYQANVTSLK LMHILIKSGV DKSTPQKFLD NQNKREYPFS IPILQDVTFL 180
181 RLLIDLLVSN YADVRELSKE MLFIMISADE SRGLFLDTLD ANALKWTATS LLSDYEKGDA 240
241 GATVYEFIFT VMGSQRSFID QTIDILAQMV QNLQNDSIGC AENSIGPHFA ALSLILNKFN 300
301 SEENHQDTSK IISKLINLVL KSWEATRNVV CHDSAHGILP EKYANCGVPD QVIISHAFRA 360
361 IKEASYLLET ILKKYPLTRD QLDSIGDLFI VQLSTIRHSG AFQAVLPGLK AFCIRCQLEF 420
421 PAILEELLSK SVKSLKSKTQ HITRRSGGLP FLVTTVLSAE VTKGRPLLQK TFENLLLVAR 480
481 LPIPPHQDEF DLPQVNAINC INAIFVEPKL SVHCTSFVSE ALELALLNFD CDIWALRNCS 540
541 IMLFTSLQNR IFGKVGRSVS AKLFFTKYSG LRQLLLNILN SSIAQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [890-1031] |
1 11 21 31 41 51
| | | | | |
1 YSGSERKSYQ IESIFLVLNV LLRLRPTAGY TGLKEFNVSV YECLSNENWK IRDMASRVLH 60
61 MLSENFEEEI RKLLDLASIA KQNQLHGHLL ALQQLVPQYL SGTRDMELIQ RILEKKRMLL 120
121 LENKCFITKK AYLKLTCCIL ET
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1032-1420] |
1 11 21 31 41 51
| | | | | |
1 CDIPDSILKD YISTLRNTFI AENNEYVVDG SKQLYLAQIL DMLLKYEDSI YLDDICLLGL 60
61 YSPFYEAQLS TLQYMNTNFH WETTRNSEFL EQLQLLLRVP DLLPMAKALV VKILSRKKNT 120
121 LSLTTCTDLL KTNNSEDTKL AAVSSLSAKL SSQTFHQVWN LLQGFFADSC SKDFRLASLE 180
181 CLTAYPESCK NSRILLQLYN FLWDDDSEIR EKASFYLNKN FIQTADWEYN RNTSVTALIF 240
241 TKKFVDVFTS SEVVEELCLQ LFQYLNEYDM FAAEESAKNC LFTIEKDNQF INELQKAMHI 300
301 LNMIKLTGRD ISKCYKDQIH HLKSALLEHF NTEDFKDSPL GWCSNAEIFS RITLLKELIQ 360
361 HYSPSDYENF INVLTKHSVH PLIISYSQL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.68714838468719 | bayes_pls_golite062009 |
| protein binding | 1.3800948965226 | bayes_pls_golite062009 |
| RNA binding | 0.538045152794259 | bayes_pls_golite062009 |
|
Region A: Residues: [1256-1420] |
1 11 21 31 41 51
| | | | | |
1 ADWEYNRNTS VTALIFTKKF VDVFTSSEVV EELCLQLFQY LNEYDMFAAE ESAKNCLFTI 60
61 EKDNQFINEL QKAMHILNMI KLTGRDISKC YKDQIHHLKS ALLEHFNTED FKDSPLGWCS 120
121 NAEIFSRITL LKELIQHYSP SDYENFINVL TKHSVHPLII SYSQL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
