| Protein: | FUS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 677 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FUS2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..677] | [1..677] |
|
|
0.0 | [33..532] | [1919..2395] |
|
|
9.0E-74 | [6..454] | [86..507] |
|
|
5.0E-71 | [6..454] | [86..507] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MFKTSYNLYD LNYPKNDSLT PIRDYKNDYF HKNDDKLPEI VRKPTRKLSK HENKLNDKKF 60
61 TNKRPA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.379 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.380 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.360 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.405 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.405 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.381 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.380 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.379 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.360 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.340 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.322 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.319 | a.4.1 | Homeodomain-like |
| View | Download | 0.302 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.299 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.299 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.297 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.291 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.281 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.280 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.278 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.275 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.274 | a.2.7 | tRNA-binding arm |
| View | Download | 0.263 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.255 | a.3.1 | Cytochrome c |
| View | Download | 0.244 | a.5.2 | UBA-like |
| View | Download | 0.230 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.227 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.224 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.213 | d.58.17 | Metal-binding domain |
|
Region A: Residues: [67-321] |
1 11 21 31 41 51
| | | | | |
1 SLDLHSIVES LSNKKIYSPI NTEIFQNVVR LNLSPQIPNS PHEGCKFYKI VQEFYLSEVE 60
61 YYNNLLTANN VYRKALNSDP RFKNKLVKLD SSDELLLFGN IDTIASISKI LVTAIKDLLL 120
121 AKQRGKMLDA NEWQKIFTKN EVQQQLYSTF DISEAFEQHL LRIKSTYTSY FVSHQKQMEL 180
181 FTTLRMNKNH FFNKWYEYCL KESGCIKLED ILKSPMKRLT QWIDTLETLE SCYEDILSPE 240
241 LGLKLSPTRR KYSLF
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1lb1A_ |
| Description: | Dbl's big sister, Dbs |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [322-477] |
1 11 21 31 41 51
| | | | | |
1 SNKLETEVSE YKSNSMYNFS LTPSEIIQSY DEDQFTHLLK PPDKQNKNIC NASRQESNLD 60
61 NSRVPSLLSG SSSYYSDVSG LEIVTNTSTA SAEMINLKMD EETEFFTLAD HISKFKKVMK 120
121 GLLELKKNLL KNDLSGIIDI SLRRINAWKK VIECER
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1lb1A_ |
| Description: | Dbl's big sister, Dbs |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.77939509501739 | bayes_pls_golite062009 |
| protein binding | 1.73388848066577 | bayes_pls_golite062009 |
| identical protein binding | 0.30171065418349 | bayes_pls_golite062009 |
|
Region A: Residues: [478-677] |
1 11 21 31 41 51
| | | | | |
1 PSGAFFAHDN LISTMCSSYI DKLHEQKNQV TILKLTELET DVMNPLERII AHCTTVKSKL 60
61 KDLQALKKDY MLFLQEKKAN VRDIKRDLLG MHFQNLQNQM KRELPVFITL IHDTIECILL 120
121 NYIKVFLKYL EIIAGGKKYL QKDLENMSLN DSIATGQIKN LDILQCYSKS RYMTKRMVRK 180
181 DWPFPGDPSG SRVVRKLFEL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
