| Protein: | CIK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 594 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIK1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-62 | [2..512] | [204..725] |
|
|
2.0E-62 | [2..512] | [1193..1714] |
|
|
9.0E-62 | [2..512] | [1189..1710] |
|
|
1.0E-61 | [2..512] | [142..663] |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MNNSKIPKLS FHSDPNNVTR DFPKTKRQKV QKREMDMILT PNNNKLNILH SSGSGIRRCY 60
61 TDDTSATYTK KLTFGGDPKI IERVKNNERK VRKDIDSLLN AISEIEKESV RIHARELPAI 120
121 TLELDAKVKA CRELQNEIDG LSTEMDLKDN QCDLQRKNVE LSSKNIVSMH AVKVQEFEND 180
181 LEEELSNAKR EWTYKLMEVE NLKPDERLTD EMRQLKTEFE EVNRKLFILQ NENENECKNY 240
241 KKELDKKFEI FKKVKNDARI ELDGEQERLS KVLKDLQDTH GELKENIKTC RDEFNDFEKR 300
301 IGEAEVNFHS MELAVVPLKK KLASTSQALT QVQEEKKQVE GEANNWKKKY VNELEKVQQE 360
361 LY
|
| Detection Method: |  |
| Confidence: | 13.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-406] |
1 11 21 31 41 51
| | | | | |
1 TRQNLATSIE EIKGYTRCFA YANERQMPDE FHINYVDRCI CENS
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-523] |
1 11 21 31 41 51
| | | | | |
1 GEKRVQVFDR VVLEEIHKDH KRLYNECIPF LEKYISKLIN CSIIVVSQQP TAPMKKTLLK 60
61 QLIEQYGENY KMTLNILHLD GSIKHSDVGL DNPTEIRDLS QDEECMNILT LDTKLGK
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [524-594] |
1 11 21 31 41 51
| | | | | |
1 DEESHSMNIY IGSMSTVQLN RELDDAPSVL SHILTKTKQC FVFKINAGEN IEKALALAGK 60
61 LKRTITLPQL D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
