| Protein: | VTI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 217 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VTI1.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-36 | [1..216] | [1..220] |
|
|
8.0E-34 | [1..216] | [1..219] |
|
|
2.0E-33 | [3..213] | [243..455] |
|
|
9.0E-33 | [2..216] | [8..228] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MSSLLISYES DFKTTLEQAK ASLAEAPSQP LSQRNTTLKH VEQQQDELFD LLDQMDVEVN 60
61 NSIGDASERA TYKAKLREWK KTIQSDIKRP LQSLVDSGDR DRLFGDLNAS NIDDDQRQQL 120
121 L
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [122-217] |
1 11 21 31 41 51
| | | | | |
1 SNHAILQKSG DRLKDASRIA NETEGIGSQI MMDLRSQRET LENARQTLFQ ADSYVDKSIK 60
61 TLKTMTRRLV ANKFISYAII AVLILLILLV LFSKFK
|
| Detection Method: | |
| Confidence: | 27.071898 |
| Match: | 1gl2C_ |
| Description: | Vesicle ransport v-SNARE protein VTI1b |
Matching Structure (courtesy of the PDB): |
|
