| Protein: | EAR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 550 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EAR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..550] | [1..550] |
|
|
1.0E-82 | [66..378] | [922..1213] |
|
|
1.0E-82 | [68..378] | [931..1214] |
|
|
3.0E-82 | [66..378] | [922..1213] |
|
|
1.0E-78 | [66..378] | [921..1212] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MSFKFLIESL LLGSISGQIR CGRSSVIPRG DVSYGGDDTD ELNMDIMLFA FGTLIVVYIV 60
61 ICIVYFFTKQ IATRLITAYY NEHGPGQRIS LFSDYDENNA HVHSRRLMEN MSLRWPNNLD 120
121 DADEVRDKLA QLSPEEQFYY KQGEEYIKQN PPFLLNQGLL QQSEDSNP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.257 | 0.875 | endosome | d.19.1 | MHC antigen-recognition domain |
|
Region A: Residues: [169-424] |
1 11 21 31 41 51
| | | | | |
1 DTTREDPIMN EQTRQYIQEE GAYAWEFSPN PDMPNHTVIV ENKTEVSFLN YNYDASISTN 60
61 LPIPCINKVY YCEFKIFETD GPLNSDENVS KGVISFGLST QPYPYFRLPG RHHHSIAYDS 120
121 NGARRFNDSF KLNEQLRTLF PQCEKGDIVG IGYRSRSGTV FFTRNGKKLN EKSVGGHIRG 180
181 WKFQYLYPII GSNVPCQIHV NFGTYGFVYI EANVKKWGYA KSNGIKLPPP SYEDYGKDTL 240
241 LESGGEDNDF DEDFSD
|
| Detection Method: | |
| Confidence: | 26.259637 |
| Match: | PF00622 |
| Description: | SPRY domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.37879632043452 | bayes_pls_golite062009 |
| protein binding | 1.15590148654655 | bayes_pls_golite062009 |
| transporter activity | 0.0373253642688324 | bayes_pls_golite062009 |
| hydrolase activity | 0.00724990918244621 | bayes_pls_golite062009 |
|
Region A: Residues: [425-550] |
1 11 21 31 41 51
| | | | | |
1 GDSDNIAAGS TTNLNDDIII RNGEILPPPP GFEFTMSPPT GKKIINEEIN LDSLPMLPPS 60
61 YSDDEHHSKN DKSAISGRII GTSRNLITDE ASFDSVDNDN EDENDHERDP EQFSEFDDYE 120
121 SRMHGI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
