| Protein: | PSO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 661 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSO2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..661] | [1..661] |
|
|
3.0E-93 | [81..657] | [61..628] |
|
|
1.0E-92 | [16..646] | [8..535] |
|
|
3.0E-92 | [98..650] | [97..633] |
|
|
6.0E-92 | [80..650] | [71..633] |
|
|
4.0E-91 | [98..648] | [97..631] |
|
|
8.0E-91 | [16..646] | [8..538] |
|
|
2.0E-88 | [81..657] | [61..628] |
|
|
1.0E-86 | [79..658] | [70..624] |
|
|
2.0E-85 | [148..656] | [38..521] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MSRKSIVQIR RSEVKRKRSS TASSTSEGKT LHKNTHTSSK RQRTLTEFNI PTSSNLPVRS 60
61 SSYSFSRFSC STSNKNTEPV IINDDDHNSI CLEDTAKVEI TIDTDEEELV SLHDNEVSAI 120
121 ENRTEDRIVT ELEEQVNVKV STEVIQCPIC LENLSHLELY ERETHCDTCI GSDPSNMGTP 180
181 KKN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [184-296] |
1 11 21 31 41 51
| | | | | |
1 IRSFISNPSS PAKTKRDIAT SKKPTRVKLV LPSFKIIKFN NGHEIVVDGF NYKASETISQ 60
61 YFLSHFHSDH YIGLKKSWNN PDENPIKKTL YCSKITAILV NLKFKIPMDE IQI
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 1ddkA_ |
| Description: | Zn metallo-beta-lactamase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [297-406] |
1 11 21 31 41 51
| | | | | |
1 LPMNKRFWIT DTISVVTLDA NHCPGAIIML FQEFLANSYD KPIRQILHTG DFRSNAKMIE 60
61 TIQKWLAETA NETIDQVYLD TTYMTMGYNF PSQHSVCETV ADFTLRLIKH
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 1ddkA_ |
| Description: | Zn metallo-beta-lactamase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-466] |
1 11 21 31 41 51
| | | | | |
1 GKNKTFGDSQ RNLFHFQRKK TLTTHRYRVL FLVGTYTIGK EKLAIKICEF LKTKLFVMPN 60
61
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.460 | d.58.17 | Metal-binding domain |
| View | Download | 0.709 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.624 | d.58.49 | YajQ-like |
| View | Download | 0.555 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.499 | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.452 | d.58.12 | eEF-1beta-like |
| View | Download | 0.447 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.441 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.427 | d.58.5 | GlnB-like |
| View | Download | 0.396 | d.58.17 | Metal-binding domain |
| View | Download | 0.395 | d.58.17 | Metal-binding domain |
| View | Download | 0.393 | d.58.17 | Metal-binding domain |
| View | Download | 0.370 | d.58.5 | GlnB-like |
| View | Download | 0.361 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.347 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.320 | d.68.3 | SirA-like |
| View | Download | 0.314 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.308 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.298 | b.60.1 | Lipocalins |
| View | Download | 0.266 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.266 | d.64.1 | eIF1-like |
| View | Download | 0.265 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.264 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.261 | d.17.1 | Cystatin/monellin |
| View | Download | 0.257 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.255 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.252 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.251 | d.95.2 | Homing endonucleases |
| View | Download | 0.246 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.233 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.214 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.212 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.208 | d.68.3 | SirA-like |
|
Region A: Residues: [467-661] |
1 11 21 31 41 51
| | | | | |
1 SVKFSMMLTV LQNNENQNDM WDESLLTSNL HESSVHLVPI RVLKSQETIE AYLKSLKELE 60
61 TDYVKDIEDV VGFIPTGWSH NFGLKYQKKN DDDENEMSGN TEYCLELMKN DRDNDDENGF 120
121 EISSILRQYK KYNKFQVFNV PYSEHSSFND LVKFGCKLKC SEVIPTVNLN NLWKVRYMTN 180
181 WFQCWENVRK TRAAK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
