Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR124W.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..1] | [942..1] |
|
|
275.0 | [0..770] | [943..1] |
|
|
205.0 | [0..1] | [943..1] |
|
|
128.0 | [0..743] | [942..862] |
|
|
79.0 | [0..781] | [942..1050] |
|
|
73.0 | [0..749] | [943..876] |
|
|
59.0 | [0..236] | [513..93] |
|
|
51.0 | [0..724] | [943..414] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MDAGLSTMAT RNGQSSARVK LRNNLLNNDI GNIDIRDETP ISRNGNDSNI NIQPSSVPQQ 60
61 QQQQQQYYRN GMNEAPIQAP LQQRQIPMQN YSQQQRQQQQ YNFEYSNPHM NEIPLMQHNF 120
121 TKPSLSNNRD NVNGKKASSF TQSSFSNFFK HKHQFGKSKK NTKGTGGGGD G
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.240 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.240 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.224 | d.19.1 | MHC antigen-recognition domain |
|
Region A: Residues: [172-281] |
1 11 21 31 41 51
| | | | | |
1 DDDDEVILDD SANSDLTFND IQTFGHKGGD KYGYGGDSTP IIPTLVTKDR GNMSNTEYRK 60
61 YITNQRKTAM NAMAKQTKNG TLASLPPRAM SLQSFPNGNP LMQAPTPHPR
|
| Detection Method: | |
| Confidence: | 13.64 |
| Match: | |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [282-455] |
1 11 21 31 41 51
| | | | | |
1 FQPNKMVSAN YSRSNSLMSG PPGQFRQPQQ QRMLPMNNYN NHPGQFQNTP PVMPSGQQPP 60
61 QQPRTLSLTN GPRYSPQNPR PFAGHQQISQ RQQQQQQQLQ LHPMSEGYRT MSLQSQNVPQ 120
121 GFNPWSPNDN DRKAVSMKQP ISQSSISSKN NSAYSIPNVQ NNSLTTFSPS SPTD
|
| Detection Method: | |
| Confidence: | 10.16 |
| Match: | |
| Description: | No description for 1ivoA was found. |
|
Region A: Residues: [456-855] |
1 11 21 31 41 51
| | | | | |
1 ATAMPNSTKQ GSSPLKKQVN IDQPIENKGK LNVLQLSTPQ QNELKEKERK LAEMEKSLRE 60
61 REALVEEKEK ERAEKNTEAN EEEEISHESD DLNLRPASAL ETGLKDLKLE SESAVANRAS 120
121 LSTFSSTFSD SPSKQRIINT RTGMYKLENS TDINEYVTAQ EFPSPGKYNS NSDNGEMNTT 180
181 NEVDFDFNTS KRASLLQSIP ERDPKRNVSD ATIKRRESDG NGRRLSNVNI SMNQENINND 240
241 TFLYKKNNRD GHLSAVSHMS SSSRRSFISN TLPLNIDSAS ESDNFVPHMD GSPSKTKSAP 300
301 VSYDKDGMNA SEEDFSFDNT LAKPYEPLYA RRGDITSAGS TSGEDSSQPK MITISGEQLN 360
361 LITENKELMN ELTLVSTELA ESIKRETELE ERIRLYETNN
|
| Detection Method: | |
| Confidence: | 10.16 |
| Match: | |
| Description: | No description for 1ivoA was found. |
|
Region A: Residues: [856-943] |
1 11 21 31 41 51
| | | | | |
1 SAPSFDDSSS VSFSDFEKEL RKKSSKIVQL IQQLNDERLK RFIAEEQLLL QENGTKPSSM 60
61 ELVGRIENLN KLIDERDSEI EMLKGRLQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.757 | a.118.1 | ARM repeat |
| View | Download | 0.735 | a.204.1 | Description not found. |
| View | Download | 0.710 | a.46.1 | Methionine synthase domain |
| View | Download | 0.687 | a.60.8 | HRDC-like |
| View | Download | 0.643 | a.118.1 | ARM repeat |
| View | Download | 0.633 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.607 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.495 | a.61.1 | Retroviral matrix proteins |
