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View Structure Prediction Details

Protein: RPL15B
Organism: Saccharomyces cerevisiae
Length: 204 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL15B.

Description E-value Query
Range		 Subject
Range
RPL15 - ribosomal protein L15
tr|G3H1F4|G3H1F4... - Ribosomal protein L15 OS=Cricetulus griseus GN=I79_003979 PE=3 SV=1
RL15_PONPY - 60S ribosomal protein L15 - Pongo pygmaeus (Orangutan)
RL15_CANLF - 60S ribosomal protein L15 OS=Canis lupus familiaris GN=RPL15 PE=1 SV=1
RL15_BOVIN - 60S ribosomal protein L15 OS=Bos taurus GN=RPL15 PE=2 SV=3
RL15_MOUSE - 60S ribosomal protein L15 OS=Mus musculus GN=Rpl15 PE=2 SV=4
tr|M3X6G6|M3X6G6... - Ribosomal protein L15 OS=Felis catus GN=RPL15 PE=3 SV=1
ENSMMUG000000063... - null, null, null, null, null, null
RL15_PONAB - 60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3
RL15_RAT - 60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2
tr|G1T0C1|G1T0C1... - pep:novel chromosome:oryCun2:14:10251810:10253810:1 gene:ENSOCUG00000010961 transcript:ENSOCUT000000...
gi|61357515 - gi|61357515|gb|AAX41398.1| ribosomal protein L15 [synthetic construct]
gi|114586199 - gi|114586199|ref|XP_001173099.1| PREDICTED: similar to ribosomal protein L15 [Pan troglodytes]
RL15_MACFA - 60S ribosomal protein L15 OS=Macaca fascicularis GN=RPL15 PE=2 SV=1
gi|149729688 - gi|149729688|ref|XP_001494663.1| PREDICTED: similar to ribosomal protein L15 [Equus caballus]
gi|149514479 - gi|149514479|ref|XP_001511656.1| PREDICTED: similar to ribosomal protein L15 [Ornithorhynchus anatin...
 3.0E-86 [1..203] [1..204]
gi|12006350 - gi|12006350|gb|AAG44837.1| 60S ribosomal protein L15 [Homo sapiens]
 6.0E-86 [1..203] [1..204]
RL15_ICTPU - 60S ribosomal protein L15 OS=Ictalurus punctatus GN=rpl15 PE=2 SV=3
 7.0E-81 [1..203] [1..204]
RL15_PETHY - 60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1
 1.0E-79 [1..203] [1..204]
RL15_NEUCR - 60S ribosomal protein L15 OS=Neurospora crassa GN=rpl-15 PE=3 SV=1
RL15_NEUCR - 60S ribosomal protein L15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 12...
 5.0E-77 [1..203] [1..203]

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Predicted Domain #1
Region A:
Residues: [1-204] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAYKYLEEL ERKKQSDVLR FLQRVRVWEY RQKNVIHRAA RPTRPDKARR LGYKAKQGFV  60
   61 IYRVRVRRGN RKRPVPKGAT YGKPTNQGVN ELKYQRSLRA TAEERVGRRA ANLRVLNSYW 120
  121 VNQDSTYKYF EVILVDPQHK AIRRDARYNW ICNPVHKHRE ARGLTATGKK SRGINKGHKF 180
  181 NNTKAGRRKT WKRQNTLSLW RYRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 893.64593
Match: 1k5yL_
Description: No description for 1k5yL_ was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle