| Protein: | MGR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 501 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGR3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..501] | [1..501] |
|
|
4.0E-59 | [77..235] | [31..185] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MLLQGMRLSQ RLHKRHLFAS KILTWTTNPA HIRHLHDIRP PASNFNTQES APIPESPANS 60
61 PTRPQMAPKP NLKKKNRSLM YSIIGVSIVG LYFWFKSNSR KQK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [104-210] |
1 11 21 31 41 51
| | | | | |
1 LPLSAQKVWK EAIWQESDKM DFNYKEALRR YIEALDECDR SHVDLLSDDY TRIELKIAEM 60
61 YEKLNMLEEA QNLYQELLSR FFEALNVPGK VDESERGEVL RKDLRIL
|
| Detection Method: | |
| Confidence: | 9.06 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.6263282952649 | bayes_pls_golite062009 |
| protein binding | 0.816793912043238 | bayes_pls_golite062009 |
| hydrolase activity | 0.63851966218836 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.397405385912849 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.368200928255565 | bayes_pls_golite062009 |
|
Region A: Residues: [211-351] |
1 11 21 31 41 51
| | | | | |
1 IKSLEINKDI ESGKRKLLQH LLLAQEEILS KSPELKEFFE NRKKKLSMVK DINRDPNDDF 60
61 KTFVSEENIK FDEQGYMILD LEKNSSAWEP FKEEFFTARD LYTAYCLSSK DIAAALSCKI 120
121 TSVEWMVMAD MPPGQILLSQ A
|
| Detection Method: | |
| Confidence: | 9.06 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [352-501] |
1 11 21 31 41 51
| | | | | |
1 NLGSLFYLQA EKLEADLNQL EQKKSKESNQ ELDMGTYIKA VRFVRKNRDL CLERAQKCYD 60
61 SVIAFAKRNR KIRFHVKDQL DPSIAQSIAL STYGMGVLSL HEGVLAKAEK LFKDSITMAK 120
121 ETEFNELLAE AEKELEKTTV LKAAKKEGLN
|
| Detection Method: | |
| Confidence: | 9.06 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
| Matching Structure (courtesy of the PDB): |
|
