Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR086W.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..1] | [960..1] |
|
|
279.0 | [0..5] | [884..758] |
|
|
255.0 | [0..421] | [948..989] |
|
|
253.0 | [0..421] | [948..989] |
|
|
231.0 | [0..344] | [947..965] |
|
|
228.0 | [0..320] | [947..983] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MFRRRTTAPE MEQADPTAVA AAASIGKLLM KKGNQSDNEQ RPTYRSASMT NLRKPSAPKR 60
61 MSSISSISSE
|
| Detection Method: |  |
| Confidence: | 12.5 |
| Match: | |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [71-416] |
1 11 21 31 41 51
| | | | | |
1 SRRSDGKGRP GKINSLTQRS SMGKGDSLNS PLTKEPQHKT RSHNRTSSLP NQRGQQSRNS 60
61 SGLQRQKSKT HQRISYDEAQ RTFKDFGGPQ ARGILTGQHR TENPSGSIPL RTTRKYIPGP 120
121 NGLVAIEVPV EKPSNANTSK LLRRSNSAHS ALNARNGSLL RKKVSQESLH SQPKKTSSLG 180
181 NTSSTQAKKG QKAVQERNLA KKHPINSNVP LIETQVREET DQELKLDNSN SSESETVVNS 240
241 ENNLEKPSSL NIEKDDLSKL IHENIELESF IEEKGKEKPL NSDQEDVFIS EKTVKGDVQW 300
301 PKNNRQASTL EKTFNYDNEE KREGNKPVAE HPLPEAEVDD KSVEQL
|
| Detection Method: | |
| Confidence: | 7.18 |
| Match: | |
| Description: | No description for 1g9uA was found. |
|
Region A: Residues: [417-474] |
1 11 21 31 41 51
| | | | | |
1 NNISSSGSYS AQGSVENSKP ENGNKNLEND TTSSPTQDLD EKSRSIEEKD TLEGTESS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.411 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.411 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.388 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.388 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.365 | a.4.15 | Description not found. |
| View | Download | 0.336 | a.4.1 | Homeodomain-like |
| View | Download | 0.309 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
|
Region A: Residues: [475-751] |
1 11 21 31 41 51
| | | | | |
1 KKVEKPDNCC EKISGANTSS KKGNVGDTKD EFFDTVEESD QKTSKSNSSK NTDHSNQTEP 60
61 TPSLAQYLRT SNTYLSRKNQ SKQAEQEKFH KPEAPMVPVT KVVTPIKSAL KKSSGSSNHD 120
121 SSMYSDNSPA NGAYLSLTTA ENTRLNAQMT MSDSVSRRAS LKRSSIKRPQ SVGQFRSIRS 180
181 NSPSPPEKIN NKRHSAIPLG TPEKGKPKRN SVMASLSKNS QQIQEPASVY ESNGPNKPKN 240
241 QINKNIKRGS QIAQNNKPST KDMNSILYPK EPPPRKS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [752-960] |
1 11 21 31 41 51
| | | | | |
1 SFEKTRSNES HLGFKKLSLR NGNFEEALSE SYNGQASQNS TNVNRTDTAQ EFFKYLGHSS 60
61 RFADSDSEDE SQFFNQGPSK YNTETEGNKT SGNKNSNGGN GAFSLFKSKS KQKENNVVSP 120
121 GVSSPNHTTT DPAITSKKVD KKFSGLSLRA ASEAEPAKNS NPSMTNRLRF SSNPENGESR 180
181 LPQAQEVSVT KEKKGSFGKK LKKIFGRKK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
