| Protein: | IRC21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 201 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC21.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-60 | [2..199] | [407..585] |
|
|
1.0E-60 | [2..199] | [413..591] |
|
|
3.0E-60 | [2..200] | [402..587] |
|
|
3.0E-60 | [2..200] | [438..617] |
|
|
5.0E-60 | [2..200] | [439..618] |
|
|
6.0E-60 | [2..201] | [430..610] |
|
|
6.0E-60 | [2..200] | [416..596] |
|
|
8.0E-60 | [2..200] | [431..610] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSSDGMNRDV SNSKPNVRFA APQRLSVAHP AISSPLHMPM SKSSRKPLVR TKIRLDPGHS 60
61 ALDWHSLTSN PANYYTKFVS LQLIQDLLDD PVFQKDNFKF SPSQLKNQLL VQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.324 | a.1.1 | Globin-like |
| View | Download | 0.373 | d.110.4 | SNARE-like |
| View | Download | 0.317 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.330 | d.110.4 | SNARE-like |
| View | Download | 0.266 | d.110.4 | SNARE-like |
| View | Download | 0.233 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.229 | c.3.1 | FAD/NAD(P)-binding domain |
|
Region A: Residues: [113-201] |
1 11 21 31 41 51
| | | | | |
1 KIPLYKIMPP LRINRKIVKK HCKGEDELWC VINGKVYDIS SYLKFHPGGT DILIKHRNSD 60
61 DLITYFNKYH QWVNYEKLLQ VCFIGVVCE
|
| Detection Method: | |
| Confidence: | 71.512579 |
| Match: | 1b5m__ |
| Description: | Cytochrome b5 |
Matching Structure (courtesy of the PDB): |
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